Mercenaria mercenaria (northern quahog): 128555684
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Entry
128555684 CDS
T07835
Name
(RefSeq) ATP-dependent RNA helicase DDX4-like isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmer03036
]
128555684
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128555684
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128555684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
zf-CCHC_3
zf-CCHC_2
ResIII
HEM4
CMS1
Cas3-like_C_2
Utp25_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
128555684
NCBI-ProteinID:
XP_053394752
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Position
3:complement(64768223..64816903)
Genome browser
AA seq
766 aa
AA seq
DB search
MSDDWDESPAQVAPSFGGGGQKGFGRGVLRQDDSSSTDTNVGKMNGFGGGRGGFKGGENR
PNGFGGGRGGFGSGDRSNGSGGSGGFGSRNTDSGGGDGGFGQKKSFGGGGRGGGFGNKTE
NGESSSGGGGFGNKSGFGSSSGGGGGFGGDRPPRGGGFGGGDKKSGDGCFKCGESGHFSR
ECPNGFGRGRGWLPAGSGGGGGDKKCFKCGEEGHFSRECPSAGVGGGGGGGGSKNCFKCG
EEGHFSRECPNADKAGEGKGISLDGERPPPYIPPTPSENEEDIFMSIQKGINFDNFDKIP
VEVTGRDAPPCIQSFDDAGIYDTFLGNVRKAKYEKPTPVQKYSIPIIMGGRDLMGCAQTG
SGKTAAFILPTLTGMMKNGLSGSSFSAVQEPQALVVAPTRELATQIYMDARKFAHGSMLR
PVVLYGGTSVGYQLRQVEQGCHILVGTPGRLIDVFGKGKVSLEKIKYLILDEADRMLDMG
FGPEIKKIIGDFGMPGKTERQTLMFSATFPEEIQKLASEYLNDYLFLSVGVVGGANTDVS
QHVFEVDRLQKRDKLTEILNQSGSDKTLVFVEQKRNADFLASYLSQSGFPATSIHGDRLQ
REREEALEDFKKGRAPILIATSVAARGLDIPSVKHVVNYDLPQSIDEYVHRIGRTGRCGN
LGKATSFYTHDSDSGMAKALVKILTQASQVVPEWLETYGAGSVSTAGYIPMGGKFGGKDI
RKGMPKTRDEGENPTFGGGFGGGFSGGMGGGGSSAFGTTEDEESWD
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgactgggacgaatcacctgcccaggtggcaccatccttcgggggtggagga
cagaaaggttttggccgtggtgtattaagacaagatgactctagctcaacggacacaaat
gtaggaaaaatgaatggatttggaggaggaagagggggattcaagggtggggaaaataga
ccaaatggttttggagggggaagagggggttttggtagtggggacagatcaaatggatct
ggaggcagtggaggatttgggtctcgtaataccgactccggaggcggagatggaggcttt
ggacaaaagaagagttttgggggaggtggtaggggtggtgggtttggcaacaaaactgag
aatggagaaagcagcagtgggggaggtggctttggaaacaaaagtggttttggcagtagt
tccggtggaggtgggggttttggaggagaccgaccaccaaggggtggtggttttggtggt
ggagacaaaaagtcaggtgatggatgctttaagtgtggagaaagcggtcatttctcgaga
gaatgtcccaatggttttggccgtggtagaggctggttaccagctggaagcggaggtggc
gggggagataaaaaatgtttcaaatgtggagaagaaggacatttctccagggaatgccct
tcagccggtgtcggtggtggtggtggaggaggtgggagcaaaaactgcttcaagtgtggg
gaagaaggccatttctcaagggaatgccccaatgctgataaagcaggcgaaggaaaagga
atatcattagatggagaacgtccacccccatatattcctccaacaccatctgagaatgaa
gaggatatcttcatgtccattcagaaaggaataaactttgataattttgacaagatccct
gttgaggtgactggtagagatgctccaccgtgtatacaaagctttgatgatgcaggaatt
tatgatactttcctgggcaatgtgagaaaagccaagtacgagaaaccgacaccagtacaa
aagtactctataccaattatcatgggaggacgagatctgatgggctgtgcccagactggc
tctggaaaaactgctgcctttatcctgccaacgttaacgggaatgatgaagaatggtttg
tctggcagttctttctcagcagtgcaggaaccacaggctcttgtagtggcaccaactaga
gagctggctacacagatctacatggatgccaggaaatttgctcatggttccatgcttaga
ccagttgtattgtatggtggtacctctgttgggtaccagctacgccaggtagaacagggt
tgccatatcctggtagggacaccaggacgtctcattgatgtgtttgggaaaggaaaggtg
agcttagagaagatcaagtacctgattctagacgaagctgacagaatgttagatatgggt
tttggtccggaaatcaagaagatcattggtgattttggaatgccgggtaaaacagaacga
cagactttgatgtttagtgcaacattccctgaggagatacagaagttggcctcagaatac
ctgaatgattatctgtttttgagtgttggggttgtaggtggtgccaacactgatgtctca
caacacgtatttgaagtagacagactccagaaacgagacaaacttactgaaatccttaac
cagtcaggctcggacaagacacttgtgtttgtagaacagaagagaaatgcagatttcctg
gcatcatatttgtcacagtctggattccctgcaaccagtatacatggggacagactgcag
agggaaagagaggaggctttagaagatttcaagaaagggagagcacccatactgatagcc
acctctgtggctgctcgtggtctagatattccgtctgttaaacatgtagtcaattatgat
ctccctcagtccattgatgagtacgtccatcgtattggtagaactggtagatgtggtaat
ctaggaaaagccacttcattctatacacacgattccgactctggaatggccaaagctcta
gtcaaaatccttacacaggcatcacaagtggttcctgaatggttagaaacgtatggtgct
ggaagcgtctcaacagcaggctatattcctatgggaggcaaatttggtggaaaagatatc
agaaagggaatgccaaagacacgtgatgaaggcgagaatccaacatttggaggtggattc
ggaggtggatttagtgggggaatgggaggcggaggcagctcagccttcggtactactgag
gatgaggaaagttgggattaa
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