Methylobacterium mesophilicum: MMSR116_00200
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Entry
MMSR116_00200 CDS
T06344
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMSR116_00200 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_00200 (xth)
Enzymes [BR:
mmes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MMSR116_00200 (xth)
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MMSR116_00200 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QGY00517
UniProt:
A0A6B9FAF6
LinkDB
All DBs
Position
44329..45123
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AA seq
264 aa
AA seq
DB search
MRITTWNVNSIKQRLPHLLPFLDEARPDIVCLQELKCQDEAFPRAEVEAAGYAVETLGQK
AYNGVALLVRKPLAVAEVRRGLPGDSEDEQARYIEALVSGPETQPVRVASIYLPNGNPVA
SPKYPYKLAFLERLRLHARGLLDDETAVVLAGDYNVIPEPADAADPEAWRSDALFLPQSR
AAFRALLAEGYTDGLRACDPRDGLYTFWDYQAGCWQRNAGIRIDHLLLSPQAADRLVAAS
VQKHLRGLDKPSDHVPVTVELSAG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccacctggaacgtcaattcgatcaagcagcggcttccgcatctgctcccc
ttcctggacgaggcgcggcccgacatcgtctgcctgcaggaactgaaatgccaggatgag
gccttcccgcgcgccgaggtcgaggcggcgggctacgcggtggagacgctgggacagaag
gcctataacggcgtggcgctgctggtgcgcaagccgttggccgtggccgaggtccggcgc
ggtctgccgggcgattccgaggacgagcaggcccgctacatcgaggctctcgtctccgga
cccgagacgcagccggtgcgggtggcgtcgatctatctgccgaacggcaatccggtggcg
agtccgaagtacccctacaagctggcttttctggagcggctgcggctgcatgcgcgcggg
ctgctggacgacgagaccgcggtggtgctggccggcgactacaacgtcatccccgagccg
gcggacgcggccgaccccgaggcgtggcgctcggacgccctgttcctgccgcagagccgc
gcggcgttccgggccctgctggccgaaggttacaccgacggcctgcgcgcctgcgatccg
cgggatgggctctacacgttctgggactatcaggccggttgctggcagcggaatgccggc
atccgcatcgaccaccttctcctgtcgccccaggcggcggatcgtctggtcgcggcctcc
gtgcagaagcacctgcgcggcctcgacaagccgtcggatcatgttccagtcacggttgag
ctatcggcgggctga
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