Methylobacterium mesophilicum: MMSR116_13730
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Entry
MMSR116_13730 CDS
T06344
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03410
Base excision repair
mmes03430
Mismatch repair
mmes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMSR116_13730 (recJ)
03430 Mismatch repair
MMSR116_13730 (recJ)
03440 Homologous recombination
MMSR116_13730 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_13730 (recJ)
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MMSR116_13730 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MMSR116_13730 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MMSR116_13730 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QGY02823
UniProt:
A0A6B9FJW3
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All DBs
Position
2854167..2855993
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AA seq
608 aa
AA seq
DB search
MASVSCAPSLAEPAAYLGVAASVTGRRWQERCVGGLVQTHIAKMVQAYGLPELLARVLAG
RGIAPDAVDRFLAPRLRDLMPDPLVLLDMEAAVDRLVRAVRRGETVAVFGDYDVDGAASA
AMLADYLRGLGLKAPIHIPDRITEGYGPNSAAINTLAADGATLLVCVDCGTSGHAPLEKA
ERSGLDVIVLDHHAATEVLPPARAIVNPNRLDDLSGLGHLCAAGVVFLTLVALNRALRIG
GFFGPGRPEPALTNALDLVALATIADVVPLSGLNRAFVAQGLTVMRHRGRTGLAALLDAA
SLSEPPEAWHLGFVLGPRINAGGRIGDSALGARLLTTADPFEAARIAAELDRLNRERQAI
EAQAVMEAEAEMDRALTGDPARSVLVTGSDAWHPGVVGLIASRLKERFNRPAFAFAIRPD
GTATGSGRSIPGADLGLAVRACVEAGLASKGGGHAMAAGVTVRADDIPRFEAHLSTLLGA
SVAVARAADALLIDGSLSAGGATAETVRLLGRAGPFGQGAPEPIFALGRHRLVDAGLVGS
GHVRARLRSRDGQAVGAICFRAAERPLGLALLNGIGREMHVAGTLSCDRWRGAERAQVRI
VDVAPADS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtgtcctgtgctccatcccttgccgaacccgcggcctatctgggtgtcgcc
gcctctgtaacggggcggcgctggcaggagcgctgtgtcggcggcctcgtccagacccac
atcgccaagatggtacaggcttacgggctgcctgaattgctggcgcgggtgctggcgggc
cgcggcatcgcgccggacgcggtcgatcggttcctggcaccgcgcctgcgcgacctgatg
ccggacccgctcgtcctcctcgacatggaggccgcggttgaccggctcgtgcgcgcggtc
cggcgcggcgagaccgtggcggtgttcggagactacgacgtcgacggggccgccagcgcc
gcgatgctggcggactacctccgcggcctgggcctcaaagcgcccattcacatcccggat
cggatcaccgaaggctacggtcccaacagcgccgccatcaacacgctggcggccgatggg
gcgaccctgctggtctgcgtcgattgcggcacgagcggtcacgccccgctggagaaggcc
gagaggtctggcctcgacgtcatcgtcctcgatcaccacgccgccaccgaggtgctgccg
ccggcccgcgcgatcgtgaatccgaaccggctcgacgacctctcgggcctcggccatctc
tgcgccgccggggtggtgtttctgacgctggtcgccctcaaccgcgccctgcgcatcggg
ggctttttcggtccgggccggccggagccggcgctcaccaacgccctcgacctcgtcgcg
ctggcgaccattgccgacgtggtgccgctgtccggtctgaaccgggccttcgtcgcacag
ggtctgacggtgatgcgccatcgcggccgcaccgggctcgcggccctcctcgatgccgcc
tcgctcagtgagccgcccgaggcgtggcacctcggcttcgtcctcggcccacggatcaac
gcgggagggcgcattggcgattcggctctcggagcccgtctcctgaccaccgccgatcct
ttcgaagcggcgcggatcgccgccgagctcgaccggctgaaccgggagcggcaggcgatc
gaggcacaggcggtgatggaggccgaggcggagatggaccgcgcgctgaccggcgatccc
gcccggtcggtgctggtgaccgggagcgacgcatggcatcccggcgtcgtgggcctgatc
gcgtcccggctgaaagagcgcttcaatcgccccgccttcgccttcgcgatccggccggac
ggcaccgcgaccgggtccggacgctcgatcccgggcgccgatctcggtctggccgtgcgc
gcctgcgtggaggccgggctcgccagcaaggggggagggcacgccatggcggccggcgtg
accgtgcgcgccgacgacatcccgcgcttcgaggctcacctgtcgacacttctgggcgcg
agcgtcgccgttgcgcgggcggccgacgccctgctcatcgacggcagcctcagcgccggc
ggcgccaccgcggagaccgttcggctgctcgggcgcgccggtccgtttggacagggcgcc
ccggagccgatcttcgccctcgggcgccaccgcctcgtggatgccgggctcgtcggatca
gggcacgtccgggcacgcctgcgcagccgcgatggtcaggcggtcggcgcgatctgcttc
cgggcagccgagaggccgctcggtctagccctgctcaacggcatcggccgcgagatgcat
gtggccggaacgctgtcctgcgaccgatggcggggggccgagcgcgcgcaggtgcggatc
gtggacgtcgccccggcggacagctga
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