Methylobacterium mesophilicum: MMSR116_16560
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Entry
MMSR116_16560 CDS
T06344
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MMSR116_16560 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmes01007
]
MMSR116_16560 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmes03016
]
MMSR116_16560 (aspS)
03029 Mitochondrial biogenesis [BR:
mmes03029
]
MMSR116_16560 (aspS)
Enzymes [BR:
mmes01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
MMSR116_16560 (aspS)
Amino acid related enzymes [BR:
mmes01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MMSR116_16560 (aspS)
Transfer RNA biogenesis [BR:
mmes03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MMSR116_16560 (aspS)
Prokaryotic type
Other AARSs
MMSR116_16560 (aspS)
Mitochondrial biogenesis [BR:
mmes03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MMSR116_16560 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QGY03318
UniProt:
A0A6B9FQK5
LinkDB
All DBs
Position
complement(3426980..3428824)
Genome browser
AA seq
614 aa
AA seq
DB search
MHRYRSHTCGALRPSDVGQSVRLSGWCHRIRDHGGVLFVDLRDHYGLTQCVVDSDFPAFK
AAETVRSEWVVRIDGRVRTRPSGTENAELPTGAVEVYIDDLEVLGPAGELPLPVFGDLEY
PEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE
MSFVTQEDVFQAVEPVLRGVFEEFAEGKRVTGEFPRITYADSMLKYGVDKPDLRNPLIIA
DVTDLFARDDVAFKAFKGVIAGGGVVRAIPATGAAAQSRSFFDRLNDWARSEGAPGLGYI
VFEEENGQLSGKGPIAKFIPAEVQALIAERASAKSGDAVFFSAGPEGKAAGLAGKARIRI
GDELGLCDKDQYAFCWITDFPMYEWSEEEKRIDFSHNPFSMPNIDRDEFLNLDLDALASE
DETGANTKKILNIKAFQYDIVCNGVELSSGAIRNHRPDVMEKAFAIAGYGHEVLEQKFGG
MLNALRMGAPPHGGIAPGVDRIVMLLCNEPNIREVVLFPMNQRAEDLMMGAPSEATPKQL
RELHIRLNLPEKKA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgttaccgttcccacacctgcggggcgctccgcccgtccgacgtcggacagagt
gtccgcctctccggctggtgccaccgcatccgcgatcatggcggcgtgctcttcgtcgac
ctgcgggaccattacggactcacgcagtgcgtggtcgattccgacttcccggccttcaag
gcggcagagaccgtgcgctcggaatgggtcgtgcggatcgacggacgggtccggacgcgc
ccgtccgggaccgagaacgccgagctgccgaccggcgcggtcgaggtctacatcgacgac
ctggaggtgcttggtcccgcgggcgagctgccgctgccggtcttcggcgacctggaatat
ccggaggagacacggctgcggtaccgcttcctcgacctgcgccgggagaagctccacgcc
aacatcatgaagcgcggcgcgatcatcgactcgctccgccgccggatgcgcgagggcggc
ttcttcgagttccagaccccgatcctgaccgcgtcgagcccggagggcgcgcgcgactac
ctcgtgccgtcgcgggtccatcccggcaagttctacgcgctgccgcaggcgccgcagcag
ttcaagcagctgacgatgatcgcgggcttcgaccggtactttcagatcgcgccctgcttc
cgcgacgaggacgcccgcgccgaccgctcgccgggcgagttctaccagctcgatatcgag
atgagcttcgtcacccaggaggacgtgttccaggcggtcgagccggtcctgcgcggcgtg
ttcgaagagttcgccgagggtaagcgcgtcaccggggaatttccgcggatcacctacgcg
gattcgatgctgaaatacggcgtcgacaagccggatttgcgcaacccgctgatcatcgcg
gacgtgaccgacttgttcgcccgcgacgacgtcgcgttcaaggcgttcaagggtgtgatc
gccggcggcggcgtggtccgcgcgatcccggcgaccggggcggccgcgcagtcgcgctcg
ttcttcgacaggctgaacgactgggcccgctccgagggcgcgcccggtctcggatatatc
gtcttcgaggaggagaacggtcagctctccggcaaggggccgatcgccaagttcatcccg
gccgaggttcaggctctgatcgccgagcgggcgagcgccaaatccggcgatgcagtgttc
ttctccgccggcccggagggcaaggccgccggcctcgccggcaaggcgcgcatccgcatc
ggcgacgaactgggcttgtgcgacaaggaccagtacgccttctgctggatcaccgacttc
ccgatgtatgagtggagcgaggaggagaagcggatcgacttctcccacaacccgttctcc
atgcccaacattgaccgcgacgagttcttgaacctcgatctcgatgcgctggcatccgag
gacgagaccggcgccaacacgaagaagatcctcaacatcaaggccttccagtacgacatc
gtctgcaacggcgtggagctgtcctccggggcgatccggaaccatcgtccggacgtcatg
gagaaggcgttcgccatcgcgggctacggccacgaggtgctggagcagaagttcggcggc
atgctgaacgcactccgcatgggcgctccgccgcacggcggcattgcgccgggcgtcgac
cgcatcgtcatgctcctgtgcaacgagccgaacatccgcgaggtggtgctgttcccgatg
aaccagcgcgccgaggacctgatgatgggcgcgccctccgaggcgacgcccaagcagctg
cgcgagctgcacatccggctcaacctgcccgagaagaaggcctga
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