Methylobacterium mesophilicum: MMSR116_18910
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Entry
MMSR116_18910 CDS
T06344
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mmes
Methylobacterium mesophilicum
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmes03016
]
MMSR116_18910
Enzymes [BR:
mmes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MMSR116_18910
Transfer RNA biogenesis [BR:
mmes03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MMSR116_18910
Prokaryotic type
MMSR116_18910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QGY03735
UniProt:
A0A6B9FRZ9
LinkDB
All DBs
Position
complement(3889734..3890771)
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AA seq
345 aa
AA seq
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MPHLVQARLVNDPFSDPGVHLDFRHARRALLFDLGDVASLSARELMRVSDVFVSHAHMDH
FAGFDRLLRICLHRPLPLRLVGPEGFIARVAHRLHAYTWNLLGPHTPDFRIRVEEFDGTR
LVRAAEFRAPEQFAERAVAPTDPGPGRVLTEEEFRIDAVRLDHGIPSLAFALVEPVRVNV
WQGALERLGLVPGPWLGAAKRAARRGLPPETAVPVAEGRTLPLGDLVADLFRVGPGQKVA
YVTDTADTPDNVDRIRALAAGADTLFIEAVFREADRAAAARTRHLTAARAGALARDAGVR
RAVPFHHSARYAEAPEALTREFWAAFAGGHPNLADADRPRAAEVK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgccccacctcgtccaggcccgcctcgtcaacgacccgttctcggatcccggcgtccat
ctcgacttccgccacgcgcgccgtgccctgctgttcgatctcggcgacgtcgcgtcactg
tcggcccgcgagctgatgcgggtgagcgacgtcttcgtgtcgcacgcccacatggaccat
ttcgccggcttcgaccgtctgctgcggatctgcctgcatcgcccgctgcccctgcgcctc
gtcgggccggaggggttcatcgcccgggtcgcgcaccgcctccacgcctacacgtggaac
ctgctcgggccgcacacgccggatttccgcatccgggtcgaggagttcgacggcacccgc
ctcgtgcgcgcggcggagttccgcgccccggagcagttcgccgagcgcgcggtcgcgccg
acggatcccgggcccggccgggtgctgaccgaggaggagttccggatcgacgcggtgcga
ctcgatcacggcatcccgtcgcttgccttcgcgctggtcgagccggtgcgggtgaatgtc
tggcagggggcgctggagcggctcggcctcgtgccgggcccttggctcggcgcggccaag
cgcgcggcgcgccgcggcctgccgccggagaccgccgtgccggtggccgagggccggacc
ctgcccctgggcgacctcgtcgcggacctcttccgggtcggcccgggccagaaggtcgcg
tacgtcaccgacacggcggacacgccggacaacgtcgaccggatccgcgccctggcggcc
ggcgccgacacgctgttcatcgaggccgtgttccgggaagccgaccgggcggcggccgcg
cgcacccggcacctcaccgccgcccgcgccggggcgctggcccgggacgcgggggtgcgg
cgcgccgtgccgttccaccattcggcccgctacgccgaggcgccggaggcgctgacgcgg
gagttctgggccgccttcgcgggcggacacccgaacctggccgacgcggaccggcctcgc
gccgccgaggtgaaataa
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