Methylobacterium mesophilicum: MMSR116_18935
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Entry
MMSR116_18935 CDS
T06344
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MMSR116_18935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_18935
Enzymes [BR:
mmes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MMSR116_18935
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMSR116_18935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
PIF1
HHH_2
AAA_22
UvrD-helicase
TrwB_AAD_bind
NTPase_1
AAA_16
nSTAND3
DEAD
HerA_C
MeaB
T2SSE
AAA_29
CbiA
PaaX
Motif
Other DBs
NCBI-ProteinID:
QGY03740
UniProt:
A0A6B9FMC9
LinkDB
All DBs
Position
complement(3895721..3897916)
Genome browser
AA seq
731 aa
AA seq
DB search
MNQRATPQPPDRGQPVEALAGTIERVTFHSPETGFCVLKVQARGKRDLVPVIGHAPAIGA
GEWITATGIWHTDRQHGLQFRADTLKVTPPTGIAGIEKYLASGHMRGIGPAMAKRIVAAF
GEGTFEIIEADPGRLTEVGGIGPKRAARIVAGWAEQKAVREIMLFLHAHGVGTARAVRIF
KTYGHEAIAVMTEDPYRLAKDIRGIGFKTADAIAMKLGLTREAPQRLRAGISFALQTATD
AGHCALPVAELVTLAVELLGVEAPLIRAALLEVLETGEVVQDIVGDKACIFLAGLHAAER
AIAERLLQRAQGAPPWPEIDLDRALPWVAEKTGKTLSPSQGEAVRRVLGAKLAVVTGGPG
VGKTSTLDTILRILRAKGVRVLLAAPTGRAAKRMSEQTGLEAKTLHRLLEIDPKHGGFSR
NAENPLACDLLVVDETSMVDVPLMNALTKAIPEHAGLLLVGDVDQLPSVGPGQVLADIIA
SGAVPVARLTEVFRQAAESRIVVNAHRINAGQMPEPAPRGAESDFHLIEIDEPEAAVGTL
VEVVTRRIPARFGLDPVRDVQVLTPMQRGVLGARNLNHALQAVLNPDPAISVERFGWRFS
PGDRVMESQNDYDREVFNGDLGTVARIDPEEGAVIVEFEGREVIYPYGELDTLVPAYATT
IHKSQGSEYPAVVIPVAMQHWTMLARNLLYTGVTRGKRLVVLLGQRKAVAVAVRGGTMKP
RWTKLRDWLGG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcgagcgacgccacagccccccgaccgcggccagcccgtcgaggcgctggcc
gggacgatcgagcgcgtcaccttccacagccccgagaccggcttctgcgtcctgaaggtc
caggcgcgcggcaagcgcgacctcgtgccggtgatcggccacgcgccggccatcggggcg
ggcgagtggatcacagccaccggcatctggcacacggaccgccagcacggcctgcagttc
agggccgacaccctcaaggtgacgccgccgaccgggatcgccggcatcgagaagtacctc
gcctcgggccacatgcggggcatcggccccgccatggccaagcggatcgtcgcggctttc
ggggaaggcacgttcgagatcatcgaggccgatcccggccgcctcaccgaggtcgggggg
atcgggcccaagcgcgccgcccgcatcgtcgccggctgggccgagcagaaggccgtgcgc
gagatcatgctgttcctgcacgcccacggcgtcgggaccgcccgggcggtgcggatcttc
aagacctacggccacgaggccatcgcggtcatgaccgaggatccctaccggctggccaag
gacatccgcggcatcggcttcaagaccgcggacgccatcgcgatgaagctcgggctcacc
cgggaggcgccgcagcgcctgcgggccgggatctcgttcgccctgcagaccgccaccgat
gccggtcactgcgccctgccggtggccgagctcgtcaccctggcggtcgagctgctgggc
gtggaggcgcccctgatccgcgcggcgctgctcgaggtcctggagaccggcgaggtcgtg
caggacatcgtgggcgacaaggcctgcatcttcctggccggcctgcacgccgccgagcgg
gccatcgccgagcggctgctgcaaagggcgcagggcgcgccgccctggccggagatcgac
ctcgaccgggcgctcccctgggtggcggagaagaccggcaagacgctctcgccctcgcag
ggcgaggcggtgcggcgcgtgctcggcgccaagctcgccgtggtgaccggcggcccgggg
gtgggcaagacctcgaccctcgacacgattctgcggatcctgcgggcgaagggcgtgcgg
gtgctgctcgccgcccccaccggccgggccgccaagcggatgagcgagcagacggggctg
gaggccaagaccctccaccgcctgctggagatcgacccgaagcacggcggcttctcgcgc
aacgcggagaacccgctggcctgcgacctgctcgtcgtcgacgagacctcgatggtcgac
gtgccgctgatgaacgccctgaccaaggcgatccccgagcacgcgggcctgctgctggtc
ggcgacgtcgaccagctgccatcggtcgggccggggcaggtgctcgccgacatcatcgcc
tccggcgccgtgccggtggcgcggctaacggaggtttttcggcaggcagccgagagccgg
atcgtggtgaacgcccaccggatcaatgccggacagatgcccgaaccggccccgcgcggc
gcggagagcgacttccacctcatcgagatcgacgagcccgaggcggccgtcgggaccctg
gtcgaggtggtgacgcggcgcatcccggcccggttcggcctcgatccggtgcgcgacgtg
caggtgctcaccccgatgcagcgcggggtgctcggcgcgcgcaacctcaaccacgccctc
caggcggtgctgaacccggacccggcgatctcggtggagcggttcggctggcgcttctcc
cccggcgaccgggtgatggagagccagaacgactacgaccgggaggtgttcaacggcgac
ctcggcaccgtggcgcgcatcgacccggaggagggcgcggtgatcgtcgagttcgagggg
cgggaggtgatctatccctacggcgagctcgatacgctggtgccggcctacgccacgacg
atccacaagtcgcaagggtcggaatacccggcggtggtgatcccggtggcgatgcagcac
tggaccatgctggcgcgcaacctcctctacacgggcgtgacccgcggcaagcggctggtc
gtgctgctcgggcagcgcaaggcggtggcggtggcggtccgcggcggcacgatgaagccg
cgctggacgaagctgcgggactggctgggcgggtga
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