Methylobacterium mesophilicum: MMSR116_20835
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Entry
MMSR116_20835 CDS
T06344
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mmes
Methylobacterium mesophilicum
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_20835
Enzymes [BR:
mmes01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MMSR116_20835
DNA repair and recombination proteins [BR:
mmes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MMSR116_20835
Prokaryotic type
MMSR116_20835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QGY04073
UniProt:
A0A6B9FNA9
LinkDB
All DBs
Position
4296778..4298166
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AA seq
462 aa
AA seq
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MAIQGERIRVLNDVEPCGDGAYVLYLLQQANRSTFNPALEFAIEEANRLNLPVVACFGLL
DGANGFPEANARHYAFLLQGLADAKAGLEKRGVGFVMRKASPARIAIDLAKDAALLVLDR
GYLAIQKAWYREIAGAVKTRIVQVEGDVVVPVEMASKKHEFAARTLRPKLNRLWDPFVAE
LKPRKPKCAASGLGLKSAVDVSDPDAVLAGMTLDRAVGPVKRFVGGETQARKRLKAFLKD
GFSGYGAGRNRPEAAAASHMSPYLHFGQISPVEIALAVRAAKAGDDDDRSAYLEELIVRR
ELAMNHVFYTEGYDDYETAVPDWARKTLAEHAKDKRPHAYSEAQLAAGETHDRYWNAAMR
EMRETGYMHNQLRMYWGKKILEWSPSPKEGFARTLRLNNRYFLDGRDPNSFTNVAWVYGL
HDRPWQNRPVFGTVRYQSENSLKKFDAKSYVQAVERLCAAEG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccagggtgagcggatccgggttctcaacgacgtcgagccctgcggcgacggg
gcctatgtcctgtatctgctccagcaggccaaccggtccacgttcaacccggccctcgaa
ttcgccatcgaggaagcgaaccgcctgaacctgccggtggtcgcctgcttcggcctgctc
gacggcgccaacggcttccccgaggccaatgcccggcattacgccttcctgctccagggg
ctcgcggatgcgaaggccggcctggagaagcgtggggtcggcttcgtcatgcgcaaggcc
tcgcccgcgcggatcgccatcgacctcgccaaggacgcggcgctcctcgtgctcgaccgc
ggctacctcgccatccagaaggcctggtaccgggagatcgccggcgcggtgaagacccgg
atcgtccaggtcgagggcgacgtggtcgtgccggtggagatggcctcgaagaagcacgag
ttcgccgcgcggaccctgcggccgaagctgaaccggctctgggacccgttcgtcgcggag
ctcaagccgcgcaagccgaaatgcgccgcctccggtctcgggctgaagagcgcggtcgac
gtctccgatccggatgcggtcctggccgggatgacgctcgaccgggcggtagggccggtg
aagcgtttcgtcggcggcgagacgcaggcccgcaagcggctgaaggcgttcctgaaggac
ggcttctccggctacggcgccgggcggaacaggccggaggccgccgccgcctcgcacatg
agcccctacctgcatttcgggcagatctcgccggtggagattgccctcgcggtgcgggcg
gccaaggccggcgatgacgacgaccggagcgcctatctggaggagctgatcgtccggcgc
gaactcgccatgaaccacgtcttctacacggagggctacgacgattacgagacggccgtc
ccggactgggcgcgcaagaccttggccgagcacgccaaggacaagcgtccccacgcctat
tcggaggcgcaactggcggccggcgagacccacgaccgctactggaacgcggcgatgcgc
gagatgcgcgagaccggctacatgcacaaccagctgcggatgtactggggcaagaagatc
ctcgaatggtccccctcgcccaaggagggcttcgcccgcacgctccggctcaacaaccgc
tacttcctcgacgggcgcgatccgaattccttcaccaacgtcgcctgggtgtacgggctg
cacgaccgcccctggcagaaccgcccggtcttcggcacggtgcgctatcagagcgagaac
tcgctgaaaaagttcgacgccaagtcgtacgtgcaggcggtggagaggctctgcgcggcg
gaggggtga
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