Methylobacterium mesophilicum: MMSR116_21005
Help
Entry
MMSR116_21005 CDS
T06344
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmes
Methylobacterium mesophilicum
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmes03016
]
MMSR116_21005 (truB)
Enzymes [BR:
mmes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MMSR116_21005 (truB)
Transfer RNA biogenesis [BR:
mmes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMSR116_21005 (truB)
Prokaryotic type
MMSR116_21005 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QGY04104
UniProt:
A0A6B9FSW8
LinkDB
All DBs
Position
4334360..4335388
Genome browser
AA seq
342 aa
AA seq
DB search
MTVSIDDHSHGERPPAVPSAERRGPEGRRPQRGPRPDRPKRRDVSGWVILDKHVGMTSTH
AVAVVKRAFNAKKAGHAGTLDPLASGILPIALGEATKTVPFVMDGRKAYRFTVQWGVETD
TDDAEGRAVATSDARPDRAAVEAALPAFVGAIEQVPPRYSAIKIQGERAYDLAREGETVE
LVARPVQIDRLAVMEHDGERTVIEAECGKGTYVRALARDLGRMLGCYGHVAALRRTRVGP
FSEAEACPVSALTEGSPEAAMTYLRPVETALDAIPEVAVSRDLGLRLMRGQPVILRGRDA
PVEGKAFATCAGILVAVGDVERGELVPHRVFHLGGTAPNRGA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacggtttccatcgacgatcattcgcacggcgagcgtcctcccgcggttccgagcgcc
gagcgtcggggcccggagggccgccgcccgcagcgcggcccgcgcccggaccggcccaag
cgccgcgacgtctcgggctgggtgatcctcgacaagcatgtcggcatgacctcgacccac
gctgtcgccgtggtgaagcgcgccttcaacgccaagaaggccgggcatgccggcaccctc
gatcccctcgcgtccggcatcctgccgatcgcgctcggtgaggcgaccaagaccgtcccc
ttcgtcatggacggccgcaaggcctaccgcttcaccgttcagtggggcgtcgagaccgat
accgacgatgccgaggggcgcgccgtcgccaccagcgatgcccgcccggaccgcgcggcg
gtcgaggcggcgctgccggccttcgtcggggcgatcgagcaggtgccgccgcgctactcc
gccatcaagatccagggcgaacgcgcctacgacctcgcccgcgagggcgagaccgtggag
ctggtcgcgcggccggtgcagatcgaccgactcgcggtgatggagcatgacggcgagcgc
accgtgatcgaggccgagtgcggcaagggcacctacgtccgcgcgctcgcccgcgacctc
ggccgtatgctcggctgctacggccatgtcgcggccctgcgtcggacccgtgtcggtccc
ttctcggaggccgaggcctgtccggtcagcgccctcacggaaggcagccccgaggccgcg
atgacctacctgcgcccggtggagacggcccttgacgcgatcccggaagtcgccgtttcc
cgcgatctgggcctgcgcctgatgcgcgggcagccggtcatcctgcggggccgcgacgcg
cctgtggagggcaaggctttcgcgacctgcgcgggcatcctggtggccgtcggcgacgtg
gaacgcggcgaattggtgccccaccgtgtgttccatctcggcgggaccgctccgaaccgc
ggggcgtga
DBGET
integrated database retrieval system