Methylobacterium mesophilicum: MMSR116_23225
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Entry
MMSR116_23225 CDS
T06344
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMSR116_23225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmes03021
]
MMSR116_23225
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_23225
Enzymes [BR:
mmes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMSR116_23225
Transcription machinery [BR:
mmes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MMSR116_23225
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MMSR116_23225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF4249
Motif
Other DBs
NCBI-ProteinID:
QGY04499
UniProt:
A0A6B9FRI6
LinkDB
All DBs
Position
4823736..4824755
Genome browser
AA seq
339 aa
AA seq
DB search
MVIQKNWQELIKPNKLQVTTGDDPKRVATVVAEPLERGFGTTLGNALRRVLLSSLQGAAV
TSVQIDGVLHEFSSIPGVREDVTDIVLNIKTIAIRSQTDAPKRMTLRKTGPGLVTAGDIG
TVGDIQILNPDLVICTLDDGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSLFSPV
TKVSYRVETTREGQDLDKDKLTMTVETNGAVSPEDALAYAARIIQDQLQVFVNFEDPRKE
EAAPLAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEGEMLRTPNFGRK
SLNEIKEVLAGMGLHLGMDIPGWPPENIEDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtcattcagaagaattggcaggaactgatcaagccgaacaagctgcaggtcacgacc
ggcgacgaccccaagcgggtcgccacggtcgtcgccgagccgctggagcgcggcttcggc
acgacgctgggcaacgccctgcgccgggtgctcctgtcgtcgctccagggcgcggccgtg
acttcggtgcagatcgacggcgtgctgcacgagttctcgtcgatcccgggcgtgcgcgag
gacgtcaccgacatcgtcctcaacatcaagaccatcgcgatccgctcgcagacggacgcg
cccaagcgcatgaccctgcgcaagaccggcccgggcctcgtcaccgccggtgacatcggt
acggtcggcgacatccagatcctgaaccccgacctcgtgatctgcaccctcgacgacggc
gccgagatccgcatggagttcacggtcgccaccggcaagggctacgtcccggccgagcgc
aaccgccccgaggacgcgccgatcggcctgatcccggtggactcgctgttctcgcccgtg
accaaggtcagctaccgcgtcgagacgacccgcgagggccaggatctcgacaaggacaag
ctcaccatgacggtggagaccaacggcgcggtatcgccggaggatgcgctcgcctacgcg
gcgcgcatcatccaggaccagctgcaggtcttcgtgaacttcgaggatccgcgcaaggaa
gaggccgcgccgctcgcgccgcagctgcccttcaacccggcgctgctcaagaaggtcgac
gagctggagctgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctacatc
ggcgacctgatccagaagtccgagggcgagatgctgcggaccccgaacttcggccgcaag
tcgctcaacgagatcaaggaagtgctcgccggcatgggcctgcacctcggcatggacatc
cccggctggccgccggagaacatcgaggatctcgccaagcgcttcgaggagcattactga
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integrated database retrieval system
