Methylobacterium mesophilicum: MMSR116_24100
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Entry
MMSR116_24100 CDS
T06344
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03030
DNA replication
mmes03430
Mismatch repair
mmes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMSR116_24100 (dnaE)
03430 Mismatch repair
MMSR116_24100 (dnaE)
03440 Homologous recombination
MMSR116_24100 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmes03032
]
MMSR116_24100 (dnaE)
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_24100 (dnaE)
Enzymes [BR:
mmes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMSR116_24100 (dnaE)
DNA replication proteins [BR:
mmes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MMSR116_24100 (dnaE)
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MMSR116_24100 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF1707
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGY04649
UniProt:
A0A6B9FRY4
LinkDB
All DBs
Position
5018687..5022205
Genome browser
AA seq
1172 aa
AA seq
DB search
MPRQLKEVGFVHLHVHSSYSLLEGALKVGSLIKAAVADRQPALALTDTNNLFGALEFSEK
AAGEGVQPIAGVQLSVAFEAADPHQRQAPTSHGIVLLAQDDAGYANLLRLASRAYFDTAL
GEAPRLDAAALAGCSDGLIALTGGLAGPLDAAFRAGRPELALARLKRLKEAFGEDRLYVE
LQRHGLPEEGRIETALLDLAGRHGLGIVATNEPFFAKPDDYDAHDALLAIAEGRLVSDER
RRRLTASHAFKTRAEMAELFRDLPDALQATVEIAMRCAVRARTRKPILPNFGAVAAGETP
PMADALAEASEAGAQAVSADEPTELRRQAEAGLELRLKQHGTAPGFSEDDYRKRLAFELD
VIVSMKFPGYFLIVSDFIKWAKDHDIPVGPGRGSGAGSLVAWSLLITDLDPLRFGLLFER
FLNPERVSMPDFDIDFCVEGRERVIRYVQQRYGEGQVGQIITFGTLLARGVLRDVGRVLE
MPYGQVDKLTKLVPQNPANPVTLAQAIEGEPKLQQAMEEEPIVGRLIDISKKLEGLHRHA
STHAAGVVIGDRPLEELVPLYRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTMLRCC
TDLLKQRGIEIDLASLPLDDAKTYGPMGRGETVGVFQVESAGMRKALCEMQADRLEDIIA
LVALYRPGPMANIPVYCERKLGRDAGNEASWYPDPKLEPMLKETFGIIVYQEQVMEIAKV
LAGYSLGEADMLRRAMGKKIRAEMDAQRDRFLKGCTERGLTKAKANEIFDLLAKFADYGF
NKSHAAAYALLTYQTAYLKANYPVEFLAAAMTLDIDNTDKLAEFRQDAQRLKIVVEPPSI
NTSGEVFAVRDGKIFYALAAIKGVGREAVRALVEARGDRPFKDLACLARRLNPRLINKRT
LESLVQAGALDCIEPDRARAFAAVEPMMKLAASAAEAESAGVTDMFGGVVADDVSLRIPP
HEVWPMADTLKREYAAIGFFISGHPLDEYGDLLDKLRVQNWTDFCRAVRAGTSSVGRVAA
SVLDRAERRTKTGNKMGIVTLSDRTAHFEAIIFSEGLGQYRDILEPGRPLVLQLQANLEG
EDVRARILTAEPLDQAVARHQKGIRIHLSDPRGVAPVQQRLSMRGESEVSLILKLDGGER
EVEIRLPGKFQASPALAGQLRTVPGVVQVEVS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccagctcaaggaggtcggattcgtccacctccatgtccactcgtcctattcc
ctgctcgaaggtgcgctgaaggtcggctccctgatcaaggccgcggtcgccgaccggcag
ccggcgctcgcgctcaccgacaccaacaacctgttcggcgccctggaattctccgagaag
gcggcgggcgaaggcgtgcagccgatcgccggcgtgcaactctcggtggcgttcgaggcc
gccgatccgcaccagcggcaggcaccgaccagccacggcatcgtcctgctcgcccaggac
gatgccggctacgccaacctgctgcggctggcgagccgggcctatttcgacaccgccctc
ggcgaggctccgcgcctcgacgccgcggcgctcgccggatgctcggacgggctgatcgcg
ctcacgggcggcctggccggccccctcgatgctgcgttccgggccggccggcccgagctg
gccctcgcccgcctgaagcgcctcaaggaggccttcggcgaggaccggctctacgtcgag
ctgcagcgccacggcctgcccgaggaggggcggatcgagaccgcgctcctcgacctcgcc
ggccggcacggcctcgggatcgtggcgacgaacgagcccttcttcgccaagccggacgat
tacgacgcccacgacgcgctgctcgccatcgcggagggccgactcgtctcggacgagcgc
cgccgccggctcacggcgagccatgccttcaagacccgggccgagatggccgagctgttc
cgcgacctgccggacgcgctccaggccaccgtcgagatcgccatgcgctgcgccgtgcgg
gcgcggacccgcaagccgatcctgccgaatttcggcgccgtggcggcgggcgagacgccg
cccatggcggacgcgctggcggaggcgtcggaggccggtgcgcaggcggtctcggccgac
gagccgaccgagctgcgtcgccaggccgaggccgggctggagctgcgcctgaagcagcac
ggcacggcgccgggcttctcggaagacgactaccgcaagcgcctcgccttcgaactcgac
gtcatcgtgtcgatgaagttcccgggctacttcctgatcgtctcggacttcatcaagtgg
gccaaggaccacgacatcccggtgggtccgggccgcggctcgggcgcgggctcgctggtg
gcgtggtcgctgctgatcaccgacctcgacccgctgcgcttcggcctgctgttcgagcgc
ttcctcaaccccgagcgcgtctcgatgccggatttcgacatcgacttctgcgtcgagggc
cgcgagcgggtgatccgctacgtgcagcagcgctacggcgaggggcaggtcgggcagatc
atcaccttcggcacgctgctcgcccgcggcgtgctgcgcgacgtcggccgcgtgctggag
atgccctacgggcaggtcgacaagctgaccaagctcgtcccgcagaaccccgccaacccc
gtgacgctcgcccaggcgatcgagggcgagccgaagctccagcaggccatggaggaggag
ccgatcgtcggccggctcattgacatctccaagaagctggagggcctgcaccgccacgcc
tcgacccacgcggccggcgtggtgatcggcgaccggccgctcgaggagctggtcccgctc
taccgggacccgaagaccggcatgcgggtgacccagttcaacatgaagtgggtcgagcag
gcgggcctggtgaagttcgacttcctgggcctcaagaccctgacgatgctccggtgctgc
acggacctgctgaagcagcgcggcatcgagatcgacctcgcctccctgcccctcgacgac
gcgaagacctacgggccgatgggccggggcgagacggtcggcgtgttccaggtggaatcg
gccggcatgcgcaaggcgctctgcgagatgcaggccgaccggctggaggacatcatcgcc
ctggtggcgctctaccggccgggcccgatggccaacatcccggtctattgcgagcgcaag
ctcggccgcgacgccggcaacgaggcgtcttggtatccggatccgaagctggagccgatg
ctgaaggagaccttcggcatcatcgtctaccaggaacaggtgatggagatcgcgaaggtc
ctagcgggctactcgctgggcgaggccgatatgctccggcgcgccatgggcaagaagatc
cgcgccgagatggacgcgcagcgcgaccggttcctcaagggctgcaccgagcgcgggctg
accaaggccaaggccaacgagatcttcgacctgctcgccaagttcgccgattacggcttc
aacaagagccacgcggcggcctacgcgctgctcacctaccagaccgcctacctgaaggcg
aactacccggtcgagttcctggcggccgccatgaccctcgacatcgacaacaccgacaag
ctcgccgaattccgccaggacgcgcagcgcctgaagatcgtggtcgagccgccctcgatc
aacacctcgggcgaagtgttcgcggtgcgcgacggcaagatcttctacgcgctcgcggcc
atcaagggcgtcggccgcgaggccgtgcgcgcgctggtggaggcccgcggcgaccggccg
ttcaaggatctcgcctgcctcgcccgccggctgaacccgcggctgatcaacaagcgcacc
ctggagagcctcgtccaggccggggcgctggactgcatcgagccggaccgggcgcgcgcc
ttcgcggcggtggagccgatgatgaagctcgccgccagcgcggcggaggcggaatcggcc
ggcgtcaccgacatgttcgggggcgtggtggcggacgacgtctcgctccggatcccgccc
cacgaggtctggccgatggccgacacgctcaagcgtgaatacgcggcgatcggcttcttc
atctcgggccatccgctcgacgagtacggcgacctgctcgacaagctgcgggtgcagaat
tggacggatttctgccgcgcggtccgggccgggacctcgagcgtcggccgggtggcggcc
tcggtgctcgaccgggcggagcggcggaccaagaccggcaacaagatgggcatcgtcacc
ctctcggaccggaccgcgcatttcgaggcgatcatcttctccgagggtctgggccagtac
cgcgacatcctggagccgggccgcccgctggtgctccagctccaggcgaacctggagggc
gaggacgtgcgcgcccgcatcctgacggcggagcccctcgaccaggcggtggcccgccac
cagaagggcatccgcatccatctgagcgatccgcgcggggtcgcgccggtgcagcagcgg
ctgtcgatgcggggtgagagcgaggtctcgctgatcctcaagctcgacggcggcgagcgc
gaggtggagatccggctgcccggaaaattccaggcgagcccggcgctcgccggacagctc
cggaccgtgccgggggtggtgcaggtggaggtgagctag
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integrated database retrieval system
