Methylobacterium mesophilicum: MMSR116_25250
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Entry
MMSR116_25250 CDS
T06344
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMSR116_25250 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmes03019
]
MMSR116_25250 (recQ)
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_25250 (recQ)
Enzymes [BR:
mmes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMSR116_25250 (recQ)
Messenger RNA biogenesis [BR:
mmes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMSR116_25250 (recQ)
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMSR116_25250 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
GARS_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QGY04840
UniProt:
A0A6B9FQJ1
LinkDB
All DBs
Position
5262959..5264800
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AA seq
613 aa
AA seq
DB search
MTRLDEARAALKKTFGYEDFRPGQDEVIGAVLDGADVFAVMPTGSGKSMTYQLPALVDPG
LTVVVSPLIALMHDQVQQMRSVGIQAATLNSTVAETESRETWRTLRSGDLRLLFVSPERL
LMDGCMDALRGAGVRRLAVDEAHCVSQWGHDFRPEYREIARARTALGNVQTVALTATADA
ATRAEIAERLFPQDRPPRIFVHSFDRPNIRLTFQPKDNPARQIERFLKHRRSESGIIYCS
SRKRTEQLAETLRKDGFDALPYHAGLDQGTRMRNQDRFLQEDGVVMTATVAFGMGINKPD
VRFVCHADMPNNVEGYYQEIGRAGRDGLPADTLTLYGLDDMALRRRQIDEKEISDDRRRV
ERRKLEAMITLCEGAACRRQSLLAYFGEASGACGRCDLCRGGVTLVDGTVSAQKILSAIV
RTGQRFGAAYICDVVHGKESDQIRRNGHASLKTFGVGADKPVAAWRAILRQLFAAGAIAE
NADGYGGLSMTEKGEAILYGREPVQLRPDPEPKAETRERRRAAPREDGEIALSETDEALF
QHLRGLRATLARAEGIAAFMVFPDRTLIEMARQKPVDLWALRTVHGVGERKREAYGEKFV
AAIAEFLAHPPVA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcctcgacgaggcccgcgccgcgctgaagaagacgttcggttacgaggatttc
cggcccggacaggacgaggtcatcggcgcggtgctcgacggtgccgacgtgttcgccgta
atgcccacgggctcgggcaagtcgatgacctaccagctcccggcgctggtcgatccgggg
ctcaccgtggtggtctcgccgctcatcgcgctgatgcacgatcaggtgcagcagatgcgc
agcgtcggcatccaggccgcgaccctcaactcgacggtggccgaaacggaatcccgcgag
acgtggcgcaccctgcgctccggcgacctgcgactgctgttcgtctcgccggagcgcctg
ctgatggacggctgcatggacgccctgcgcggggccggcgtccggcggctggccgtcgac
gaggcgcattgcgtctcgcaatggggccatgatttccggccggagtaccgggagatcgcc
cgcgcccggaccgcgctgggcaacgtccagaccgtggcgctcaccgccacggccgacgcc
gccacccgcgccgagatcgccgagcggctgttcccgcaggaccggcccccgaggatcttc
gtccactccttcgaccggccgaacatccggctgacgttccagcccaaggacaacccggcc
cggcagatcgagcgcttcctgaagcaccggcgttcggagagcgggatcatctactgctcg
tcccgcaagcgcacggaacagctcgccgagaccctgcggaaggacgggttcgacgccctg
ccctatcatgccggcctcgaccagggcacgcggatgcgcaaccaggaccggttcctgcag
gaggacggggtggtgatgaccgccaccgtcgcgttcggcatgggcatcaacaagccggac
gtgcgcttcgtctgccatgccgacatgcccaacaacgtcgagggttactaccaggagatc
ggccgcgccggccgcgacgggctgcccgccgacacgctgactctctacggcctcgacgac
atggcgctccggcgccgccagatcgacgagaaggagatctccgacgaccgccgccgggtc
gagcggcgcaagctcgaggcgatgatcaccctgtgcgagggggccgcctgccgccgccag
tcgctactcgcctatttcggcgaggcgagcggcgcctgcggccgctgcgacctgtgccgc
ggcggcgtcaccctggtggacggcacggtctcggcccagaagatcctctcggcgatcgtg
cgcaccggccagcgcttcggcgcggcctatatctgcgacgtggtgcacgggaaggagagc
gaccagatccgccgcaacgggcacgcgagcctcaagaccttcggggtcggcgccgacaag
ccggtggcggcgtggcgggcgatcctgcgccagctcttcgccgccggagcgatcgccgag
aacgccgacggctacggcggcctgtcgatgaccgagaagggcgaggcgatcctctacggg
cgggagccggtgcagctccgcccggatccggagccgaaggccgagacgcgcgagcgccgc
cgcgccgcgccgcgggaggacggcgagatcgccctgtccgagacggacgaggctctgttc
cagcacctgcgcggcctgcgcgccaccctcgcccgggcggaggggatcgcggccttcatg
gtctttcccgatcgcacgctgatcgagatggcccgtcagaagcccgtcgacctctgggcg
ctgcgcaccgtccacggcgtcggcgagcgcaagcgcgaggcctacggcgagaagttcgtg
gcggccatcgccgagttcctggcacatcccccggtggcgtga
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