Methylobacterium mesophilicum: MMSR116_26255
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Entry
MMSR116_26255 CDS
T06344
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmes
Methylobacterium mesophilicum
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmes03032
]
MMSR116_26255 (topA)
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_26255 (topA)
Enzymes [BR:
mmes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MMSR116_26255 (topA)
DNA replication proteins [BR:
mmes03032
]
Prokaryotic type
DNA Topoisomerases
MMSR116_26255 (topA)
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MMSR116_26255 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QGY05011
UniProt:
A0A6B9FQX1
LinkDB
All DBs
Position
complement(5485307..5487991)
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AA seq
894 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGRDYEVIASFGHIRDLPPKDGSVDPEQDFHMVWELADRGAS
RVSEIAKAVKGADKLILATDPDREGEAISWHVLEALTARKALKGIPVERVTFNAITKASV
EQAMRKPREIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVVER
EMEIERFKPREYWTLIATLTTADGATFEARLVGADGKRIQRLDVGTGDEAAAFKRDLELA
TFQVASVEAKPAKRHPQPPFTTSTLQQEASRKLGMAPAQTMRVAQRLYEGVDIGGETVGI
ITYMRTDGVDMAPEAIQDARRVIGKEFGDRYVPDVPRKYSVKAKNAQEAHEAVRPTDMGR
LPRMVARHLEPEQARLYELIWTRTMASQMESAELERTTVDVTAKVGPRTIDLRATGQVVK
FDGFLALYQEGKDDEEDEESRRLPPMKAGDPLTRERISSTQHFTEPPPRYSEASLVKRME
ELGIGRPSTYAAVLQTLRDREYVKLEKKRLQPEDKGRLVTGFLESFFRRYVEYDFTAGLE
EQLDRVSNAEIDWRAVLRDFWRDFSAAIGETKELRVADVLEALNGLLGPHIFPDKGDGSN
PRTCPTCGSGQLSLKLGKFGAFIGCSNYPECKYTRQLSASGVEGEGDGSSAEGGQPGVRV
LGDDPATGLPVTLRDGRFGPFLQLGEASTEKGAEKPKRSSLPKGLSPSDVDLNKALALLA
LPREVARHPETGEPILANLGRFGPYVQHGKTYANLGRDDDVLEIGGNRAIDLIVAKEQGG
GRGRPAADPGRPLGKDEASGRDLVVKAGKYGPYVTDGEVNATLPKSLSAEALTLDEAIAL
VNAKRASGGGKPAKRGAVRKSSARAAGGDKPAAKKTTAKKPAAKKAAAKKSSSG
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtcgtcgtcgagtcgccggccaaagccaagacgatcaataagtatctcggt
cgcgactatgaagtcatcgcctccttcgggcatatccgcgacctgccgcccaaggacggc
tcggtggatcccgagcaggacttccacatggtctgggagctggccgaccgcggggcgagc
cgggtctcggagatcgccaaggcggtcaagggcgccgacaagctgattctcgccaccgac
ccggatcgcgagggcgaggcgatctcctggcacgtgctggaggcactcaccgcccgcaag
gcgctcaagggcatcccggtcgagcgcgtgaccttcaacgccatcaccaaggcgtcggtc
gagcaggcgatgcgcaagccgcgggagatcgaccaggcgctggtcgacgcctacctggcg
cgccgggcgctcgactacctcgtgggcttcaacctctcgccggtcctgtggcgcaagctc
cccggcgcccgctcggcggggcgcgtgcagtcggtggcgctccgcctcgtcgtcgagcgc
gagatggagatcgagcggttcaagccgcgtgagtactggacgctcatcgccaccctgacg
accgccgacggcgcgaccttcgaggcgcgcctcgtgggcgccgacggcaagcgcatccag
cgcctcgacgtcggcaccggcgacgaggccgccgccttcaagcgcgatttggagctcgcg
accttccaggtggcgagcgtcgaggcgaagcccgccaagcgccacccgcagccgcccttc
acgacctcgaccctccagcaggaggcatcgcgaaagctcgggatggcgccggcccagacc
atgcgggtcgcccagcgcctctacgagggcgtcgacatcggcggcgagacggtcggcatc
atcacctacatgcggaccgacggcgtcgacatggcgcctgaggcgatccaggacgcccgc
cgggtgatcggcaaggagttcggcgaccgctacgtgccggacgtgccgcgcaagtacagc
gtcaaggccaagaacgcccaggaggcccacgaggcggtgcgccccaccgacatgggccgc
ctgcccaggatggtcgcccgccacctcgagcccgagcaggcccggctctacgagctgatc
tggacccgcaccatggcgagccagatggaatcggccgagctggagcgcaccaccgtcgac
gtcaccgccaaggtcgggccgcgcacgatcgacctgcgcgccaccggccaagtggtgaag
ttcgacggtttcctcgcgctctaccaggagggcaaggacgacgaggaggacgaggagagc
cgtcgcctgccgcccatgaaggccggcgacccgctcacccgcgagcggatcagctcgacc
cagcacttcaccgagccgccgccgcgctactccgaggcgagcctcgtgaagcgcatggag
gaactcggcatcggccggccctcgacctacgcggcggtgctgcagaccctgcgcgaccgc
gaatatgtgaagctcgaaaagaagcggctgcagccggaggacaaggggcggctcgtcacg
ggcttcctcgagagcttcttccgccgctacgtcgagtacgacttcaccgccggcctcgag
gagcagctcgaccgcgtctccaatgccgagatcgactggcgggcggttttgcgcgacttc
tggcgcgacttctcggcggcgatcggcgagaccaaggagctgcgcgtcgccgacgtgctg
gaggcgctgaacggcctcctcgggccgcacatcttccccgacaagggcgacggctcgaac
ccgcgcacctgcccgacctgcggctccggccagctctcgctgaagctcgggaagttcggc
gccttcatcggctgctccaactacccggaatgcaagtacacccgccagctctcggcctcg
ggcgtcgagggtgagggcgacggctcctcggccgagggcgggcagccgggcgtgcgcgtg
ctgggcgacgatccggcgaccggcctgcccgtgacgctccgcgacggccgcttcggtccg
ttcctgcagctcggcgaggcctcgaccgagaagggcgcggagaagccgaagcgctcgtcg
ctgccgaaggggctcagcccgtcggacgtggatctgaacaaggcgctcgcgctcctggcg
ctcccccgcgaggtcgcgcgccaccccgagaccggcgagccgatcctggccaatctcggc
cggttcgggccctacgtgcagcacgggaagacctacgccaatctcgggcgtgacgacgac
gtgctggagatcggcggcaaccgcgccatcgacctcatcgtcgccaaggagcagggcggc
ggccgcggccgtccggccgccgatccgggccggccgctcggcaaggacgaggccagcggc
cgcgacctcgtggtcaaggccggcaagtacgggccctacgtcacggacggcgaggtgaac
gccacgctgccgaagagcctcagtgccgaggcgctgaccctcgatgaggcgatcgccctg
gtgaatgccaagcgcgcttccggtggcggcaagccggccaagcgcggcgcggtccggaag
agttcggcgcgtgccgcgggcggcgacaagccggcggcgaagaagacgacagcgaagaag
cccgcggccaagaaggcggcggcgaagaagtcgagttccggctga
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