Methylobacterium mesophilicum: MMSR116_28835
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Entry
MMSR116_28835 CDS
T06344
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03420
Nucleotide excision repair
mmes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMSR116_28835
03430 Mismatch repair
MMSR116_28835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_28835
Enzymes [BR:
mmes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMSR116_28835
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMSR116_28835
MMR (mismatch excision repair)
Other MMR factors
MMSR116_28835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QGY05453
UniProt:
A0A6B9FRZ8
LinkDB
All DBs
Position
complement(6021680..6024037)
Genome browser
AA seq
785 aa
AA seq
DB search
MQNRPHALPAGDGAPSSSIAARAMGALRRDAAGYLEGLNPEQRRAVETTEGPVLVLAGAG
TGKTRVLTTRIAHLIATNRARPFDILAVTFTNKAAREMKHRIGSLIGPAGEGMPWLGTFH
AIGTKILRRHAELVGLKSDFTILGTDDQLRLMKQVILDQNVDEKRWPARALSHAIDGWKN
RGLGPEQVPPGEASSFAFGKGGALYTAYQARLATLNAVDFGDLLLLCLKLWRENPDVLAN
YQDRFRYILVDEYQDTNVAQYLWLRLLAQNRKNIACVGDDDQSIYGWRGAEVDNILRFEH
DFPGAVVVRLERNYRSTGHILAAASGLIAKNESRLGKTLRTDDEPGERVTVTGAWDSEEE
ARLLAESIESLQSKQHPLSEIAVLVRISAQMREIEDRFVQLGLPYRVIGGPRFYERAEIR
DALAYLRATVNVSDDLAFERIVNTPKRGLGDATLQQLHGYGRANRVPLRIAAQRLCETDE
LKPRVRSTLRALTESFSRWARLVESQPHSEVAQIILEESGYTEMWQKDRSADAAGRLENL
KEFVRSMEEFPDMAAFLEHVSLVMEASETEGAERVSLMTLHAAKGLEFDTVFLPGWEDGL
FPSQRALDESGRAGLEEERRLAHVGLTRARKRAKLSFAVNRRIHGLWSSTIPSRFIDELP
ESAVDVVEAPAHFSAGASRFDRNPTPFGSSYGTPGWQRAQANTAQAGTRGGFGSAPGGRS
GGPRQIEGELIAKSSGAPSAFQGGQRVFHTKFGPGTVAAVDGNKLTVDFDKAGRKMVLDS
FVQAG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccgcccgcacgcgctgcccgccggggacggcgccccgtcctcctccatcgcc
gcccgcgccatgggcgcgctccgccgcgacgccgccggctacctcgaagggctcaacccc
gagcagcgccgcgcggtcgagaccacggagggcccggttctggtgctggcgggtgccggc
accggcaagacccgggtgctgaccacccgcatcgcccacctgatcgccaccaaccgggcg
cggcccttcgacatcctggcggtgaccttcaccaacaaggccgcccgggagatgaagcac
cggatcggcagcctgatcggccccgccggcgagggcatgccctggctcggcaccttccac
gccatcggcaccaagatcctgcgccgccacgccgaactcgtcgggctgaaatccgatttc
accatcctcggcaccgacgaccagctccggctgatgaagcaggtcatcctcgaccagaac
gtcgacgagaagcgctggccggcccgcgccctgtcgcacgccatcgacggctggaagaac
cgcggcctcggccccgagcaggtgccgccgggcgaggcctcgtccttcgccttcggcaag
ggcggcgccctctacaccgcctaccaggcccggctcgcgacgctcaacgccgtcgatttc
ggcgatcttttgctcctttgcctcaagctctggcgcgagaaccccgacgtgctggccaac
taccaggaccggttccgctacatcctggtggacgagtaccaggacaccaacgtcgcccag
tacctctggctgagactgctggcgcaaaatcgcaagaacatcgcctgcgtgggcgacgac
gaccagtcgatctacggctggcgcggcgccgaggtcgacaacatcctgcgcttcgagcac
gacttccccggcgccgtggtggtgcggctggagcgcaactaccgctccacgggccatatc
ctggcggccgcctccggactcatcgcgaagaacgagagccggctcggcaagaccctgcgc
accgacgacgagccgggcgagcgcgtcaccgtgacgggcgcctgggattccgaggaggag
gcgcggctgctcgccgagtccatcgaatccctccagtcgaagcagcaccccctgtcggag
attgccgtgctggtgcggatctccgcgcagatgcgcgagatcgaggatcgcttcgtccag
ctcggccttccctaccgggtgatcggcggcccgcgcttctacgagcgggccgagatccgc
gacgcgctggcgtatctgcgcgccaccgtgaacgtcagcgacgacctcgccttcgagcgg
atcgtgaacacgccgaagcgcgggctgggcgacgccaccctgcagcagcttcacggctac
ggccgcgccaaccgggtgcccctgcggatcgccgcccagcgcctgtgcgagaccgacgag
ctgaagccccgggtccgctccaccctgcgggcgctgaccgagagcttttcccgctgggcg
cggctggtggaatcccagccgcacagcgaggtcgcgcagatcatcctcgaggagtccggc
tacaccgagatgtggcagaaggaccgctccgccgacgccgcaggccggctggagaacctg
aaggaattcgtccgctccatggaggaattccccgacatggcggccttcctggagcacgtc
tccctggtgatggaggcctcggagaccgagggggccgagcgggtctccctgatgaccctc
cacgccgccaaggggctcgagttcgacaccgtgttcctgcccggctgggaggacggcctg
ttccccagccagcgggcgctcgacgagagcggccgggccggccttgaggaggagcggcgc
ttggcccatgtcgggctcacccgggcgcgcaagcgggcgaagctctccttcgcggtgaac
cggcgcatccacggcctctggtcctcgaccatcccgtcccggttcatcgacgaattgccg
gaatcggccgtggacgtggttgaggcgcccgcccatttctccgccggtgcctcgcggttc
gaccgcaaccccacgccgttcgggtcgagctacggcacgccgggctggcagcgggcgcag
gccaacaccgcgcaggcgggcacccgtggcggctttgggtcggcgcccggcggccggtcc
ggcggcccccgccagatcgagggcgagctgatcgcaaaatcctcgggcgcgccgtccgcg
ttccagggcggtcagcgggtcttccacaccaagttcgggcccggaaccgtcgcggccgtc
gacggcaacaagctgaccgttgacttcgacaaggccggtcggaagatggtcctcgacagc
ttcgtccaggccggatga
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integrated database retrieval system
