Methylobacterium mesophilicum: MMSR116_30570
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Entry
MMSR116_30570 CDS
T06344
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMSR116_30570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_30570
Enzymes [BR:
mmes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MMSR116_30570
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMSR116_30570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QGY06431
UniProt:
A0A6B9FV48
LinkDB
All DBs
Position
6337090..6338562
Genome browser
AA seq
490 aa
AA seq
DB search
MTRGLPSPAEGDGEARAPRTITLRPGADFDGFRKAVRGLVAHGVPPEVVAWSVTDAPGLF
GAEADHTAAAPLTLPKPVAALIPQVIPHRDPERYGLLYALIWRVCHGERHLMEVDSDPLV
HRLHRMAKAIGRDLHKMHAFLRFRRAEDSGGEHYVAWFEPDHHILEAAAPFFVNRFRGMR
WSILTPEGSAHWDTETLTFGPPGDRTQLPEGDGFEAGWQTYYESTFNPARTNLKAMRAEM
PKKYWHNMPETAAIPALVRAAAGRTEAMIEREPTMPTRREPARAVAAMADQDPKTLDELN
AIIRRTEPLVPGATQAVLGEGPVGATVAFVGEQPGDQEDRQGRPFVGPAGQLLSRAMAEA
GIDRGVSYLTNAVKHFKFEERGKRRIHQKPTAGEVSHYRWWLDRELEFVAPKLVVALGAT
AVLALTGKAVPITRARGPFRFDRHDNRFQGFITVHPSYLLRLPDEAKEEAYAAFVDDLRR
VQALGRELAA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
ctgacgcgagggctaccctcccccgcagagggggatggggaggcgcgcgcgccgcgtacc
atcaccctgcgtccgggcgccgacttcgacggcttccgcaaggccgtccgcggcctcgtc
gcacatggcgttccgccagaggtggtggcgtggtcggtgacggacgcccccggcctgttc
ggcgccgaggcggatcatactgccgccgcgccgctcacccttccgaaacccgtcgccgct
ttgatcccgcaggtgatcccccaccgcgatcccgagcgctatggcctgctctacgcgctg
atctggcgcgtctgccacggcgagcggcacctgatggaggtggacagcgatccgctggtc
caccgcctgcaccggatggcgaaggcgatcgggcgcgacctccacaagatgcatgctttc
ctgcgcttccgccgggccgaggacagcggcggcgagcattacgtcgcttggttcgagccg
gaccaccacatcctggaggcggcggctccgttcttcgtcaatcgcttccgcggcatgcgc
tggtcgatcctgacgcccgaaggctcggcccactgggataccgagaccctgacgttcggg
ccgccgggcgaccgaacgcaactgcccgagggcgacggcttcgaggccggctggcagacc
tactacgagagcacgttcaacccggcccgcaccaatctgaaggccatgcgtgccgagatg
cccaagaagtactggcacaacatgcccgagaccgccgcgatccccgccctcgtccgggcg
gcggccgggcgcaccgaagcgatgatcgagagggagccgaccatgcccacacgccgcgaa
cccgcccgcgccgtcgccgccatggccgaccaggatcccaagaccctcgacgagctgaac
gcgatcatccgccggactgagccgctggtaccgggggcgacccaggccgtcctcggtgaa
gggccggtcggcgccacggtcgccttcgtgggcgagcagcccggcgatcaggaggaccgg
cagggccgcccgttcgtcgggccggccgggcagctcctgtcccgcgccatggcggaggcc
gggatcgaccgtggggtgagctacctgacgaatgcggtcaagcacttcaagttcgaggag
cgcggcaagcgccgcatccaccagaagccgacggctggcgaggtgagccattatcgctgg
tggcttgaccgggagctcgagttcgtggccccgaagctggtggtggctctaggcgcgacg
gccgtgctggcgctgaccggcaaggcggtcccgatcacccgggcgcgcggcccgttccgg
ttcgaccggcacgacaaccgcttccagggcttcatcacggtccacccgtcctaccttctg
cgcctgcccgacgaggcgaaggaggaggcctacgcggccttcgtggacgacctgcgccgg
gtgcaggcgctggggcgggagttggcggcgtga
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