KEGG   Methanococcoides methylutens: MCMEM_0142
Entry
MCMEM_0142        CDS       T03913                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mmet  Methanococcoides methylutens
Pathway
mmet03030  DNA replication
mmet03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MCMEM_0142
   03410 Base excision repair
    MCMEM_0142
   03450 Non-homologous end-joining
    MCMEM_0142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmet03032]
    MCMEM_0142
   03400 DNA repair and recombination proteins [BR:mmet03400]
    MCMEM_0142
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmet04147]
    MCMEM_0142
DNA replication proteins [BR:mmet03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MCMEM_0142
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MCMEM_0142
DNA repair and recombination proteins [BR:mmet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MCMEM_0142
Exosome [BR:mmet04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MCMEM_0142
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc Osmo_CC Troponin
Other DBs
NCBI-ProteinID: AKB84195
UniProt: A0A0E3X0B1
LinkDB
Position
149464..150480
AA seq 338 aa
MGTDIGDLLQKHTVEIAELSNKVVAIDAYNTLYQFLSIIRQRDGTPLKDSSGQVTSHLSG
ILYRFTNLIESGVKPVFVFDGKPPEFKSGTLEKRHEVRENASAKWEDAKVQGLEEEAYKY
AQASSKVTKEIIEDSIRLIELMGIPYVRAPSEGEAQAAYMVRKGDADFIGSQDYDSLLFG
APSVIRNLTITGKRKLPRKNIYVDVKPEMISLEESLEELGVTRSQLIDIAMCIGTDYNPG
LENIGPKRALKLVKEHGNIETVLSETDKEIEELDAKKEFFLNPPVTDDYDLKWIKPDRAG
VVAFLCKGHDFSEDRVNKALDRLEANMGGGQSTLDQWF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggcacagatattggtgatcttcttcagaaacatactgttgagatagctgagctttca
aacaaggtcgttgctatcgatgcctacaatactctttaccagttcctgagcataatcagg
caacgtgacggcactcctttgaaggactcgagcgggcaggtaacgtcccacctttcagga
atcctctatcgtttcacaaatctcatcgaaagcggtgtcaaaccggttttcgtttttgat
ggtaaacctcccgagttcaaatcgggaacacttgagaagcggcatgaggtccgtgagaat
gccagtgcaaaatgggaagatgcaaaggtacagggccttgaggaagaggcatacaagtat
gcacaggcctcgtcaaaggtgacgaaagagatcatcgaggactcgatcaggctcattgaa
ctgatgggtatcccttatgtgagagctccttctgaaggagaggcacaggctgcttatatg
gtgcgtaaaggggatgcggatttcatcggctcccaggactacgattcactgctattcggt
gcaccttctgttataaggaaccttacgataaccggcaagagaaaacttcctcgcaagaac
atctatgtggacgttaagccggagatgatctcccttgaggagagccttgaagagcttggt
gttacacgttcacagcttattgatattgcaatgtgcatcggcaccgattacaaccccggc
cttgagaacatcggcccgaaaagggctctcaagcttgtgaaggaacatggcaacatcgag
accgtcctgtctgagaccgacaaggagatcgaagagcttgatgctaaaaaggagttcttc
ctgaacccgccggtgaccgacgattatgacttaaaatggataaaaccggaccgtgccgga
gttgttgctttcctttgcaaaggccacgatttctcagaggacagggtcaataaggcactc
gaccgccttgaagctaacatgggcggcggacaaagtacgcttgaccagtggttctga

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