Methanococcoides methylutens: MCMEM_0720
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Entry
MCMEM_0720 CDS
T03913
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmet
Methanococcoides methylutens
Brite
KEGG Orthology (KO) [BR:
mmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmet03032
]
MCMEM_0720
03400 DNA repair and recombination proteins [BR:
mmet03400
]
MCMEM_0720
Enzymes [BR:
mmet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MCMEM_0720
DNA replication proteins [BR:
mmet03032
]
Prokaryotic type
DNA Topoisomerases
MCMEM_0720
DNA repair and recombination proteins [BR:
mmet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MCMEM_0720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
IMS_HHH_1
DNA_pol_lambd_f
IMS_HHH
Cdd1
DUF4332
HHH
Zn_ribbon_recom
TfoX_C
SAM_BAF
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AKB84773
UniProt:
A0A0E3SR86
LinkDB
All DBs
Position
complement(754426..756648)
Genome browser
AA seq
740 aa
AA seq
DB search
MHLIIAEKHIAAKRIAAILAPKKPKQVRVSGMDTYEFKDEDRTVVMGLSGHIVQLDFPKA
YNNWQKVESKELIDADVITTPTHVKIVNALKKLGKEATHVTIATDYDREGELIGVEALEI
IKKVNPEVDFDRVFYSAITKKEIDDAFANPAAIDFNLADAGHSRQVIDLVWGASLTRYLS
ISAGRLGKLFLSVGRVQSPTLALIVDKEKERQAFIPKPYWEIYATLRDKSGELFNVQHKT
QKFWDRGEAQKVMDIIGDNATVSSVVRSKKKDKPPTPFNTTEFIGAASSIGYSAANAMRI
AESLYTSGFISYPRTDNTVYPESIDLRAQIEVFKKGTFKEYAEKLLAKDKLVPTRGKKET
TDHPPIYPASLAKKNELNDQEWKLYELVVRRFFATFAEEAEWETLKVRFDIEGEEFKANG
ARLLHAGWRWYYPYNAPQDRLLPALEEGDVLSIKSKEMLDKETQPPGRYGQGRLIKLMEE
LGLGTKATRHDIISKLYSRAYVHGNPLQPTKTAFAVVEALEKYAPTITKHDMTSQLEEDM
DRIAEGNIQEENVLNESRKMLHDVFAEFDENTEKISESLRAGLREDKVIGICKECGSKLM
VRRSKRGSRFIGCDGYPDCNFSLPLPKSGQVIVTDKVCEEHGINHIKIINPGKRPWDLGC
PQCNFIEWKKTQEEEKRKQPETPRPEKITDVPGIGKVTAKKLEDAGVSTVDELEEVNARE
LSKNTGISVGKIMKWQEAIA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttatcatagcagaaaagcacattgcagccaaaaggatagcagctatccttgca
cccaagaaaccaaagcaggtccgtgtcagtggaatggacacatacgagttcaaggacgag
gacaggactgtcgttatgggtcttagcggacacattgtccagctggacttcccgaaagca
tacaacaactggcagaaagtagagtcaaaggaactcatcgatgcagatgtcattaccaca
cctacccacgtaaagatcgtgaatgcccttaaaaaactgggaaaggaagcaactcacgta
acgattgctactgactacgacagagaaggagagcttattggtgtcgaagcactggagatc
atcaagaaagtgaacccggaagtggactttgaccgtgtgttctacagtgcgatcacaaag
aaagagatcgatgatgcttttgcaaatcctgcagctattgacttcaatcttgctgatgca
ggccattccagacaggtgattgacctggtgtggggtgcatcgcttacaagatacctttca
atatcagcaggcaggttaggcaagctatttttatctgtaggaagggtgcaatcgccaaca
cttgcactgatcgttgacaaagaaaaggaaagacaggcctttatcccgaaaccatactgg
gagatctatgcaaccctcagggacaagagtggcgagctcttcaatgtccagcacaagacc
cagaagttctgggacaggggagaagctcaaaaggttatggacatcattggtgacaatgca
acggtctcctcggttgtcaggtctaagaagaaagacaagccacctacgccgttcaacact
accgagttcataggtgctgcaagttccataggttatagtgccgctaatgccatgaggatc
gcagaatcactctatacaagcggtttcatatcatacccgaggaccgacaacacggtctat
ccggaatccatcgacctgagagcacagatcgaagtattcaagaagggtactttcaaggaa
tacgctgaaaaactgctcgcaaaggacaagctcgtccctacccgtggtaaaaaagaaacc
accgaccaccctcctatctatcctgcatcccttgcaaaaaagaacgagctcaatgatcag
gaatggaagctctacgaactggtggtcagaaggttctttgcaacctttgctgaagaggca
gagtgggaaaccctgaaggtcaggttcgacattgaaggtgaggagttcaaggctaacggt
gccagactgcttcatgccggatggagatggtactacccatacaatgctccacaggacagg
cttctccctgccctggaagaaggtgatgttctcagcataaagagcaaggagatgctggac
aaggagacccagccacctggaagatacggacagggaaggcttatcaagctcatggaagag
ctgggacttggaacaaaggcaacacgtcacgatatcatcagcaagctatattcaagggca
tacgttcatggtaacccgcttcaacctacaaagacggcttttgcagtggtagaggccctt
gaaaaatacgcccctactatcacaaagcatgatatgacgagccagctggaagaagatatg
gaccgtattgcagaaggcaatatacaggaagagaatgtccttaatgaatcaaggaagatg
ctccatgatgtgttcgctgaattcgatgagaatacggaaaaaatatcagaatcgctccgt
gccggccttcgtgaggataaggtcatcggcatctgtaaagaatgcggttcaaaattaatg
gtcaggcgttcaaaacgaggttcgaggttcataggttgtgacggctatcctgactgtaat
ttctcattgccacttccaaagagcggacaggtcattgtgaccgataaagtctgtgaggaa
catggtatcaaccatataaaaatcataaatccaggtaagcgaccatgggaccttggttgc
ccacaatgtaattttattgaatggaagaagacacaggaagaagagaaacgcaagcagcct
gaaactccaagacccgagaagatcacggatgttcccggcatcgggaaagttacagctaaa
aagctggaggatgcaggcgtttcaactgtggatgaacttgaagaggtcaatgccagagaa
ctttcaaagaacacgggaatatccgtgggaaagatcatgaagtggcaggaagcaattgca
taa
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