KEGG   Methanococcoides methylutens: MCMEM_1466
Entry
MCMEM_1466        CDS       T03913                                 
Name
(GenBank) Transcription initiation factor B
  KO
K03124  transcription initiation factor TFIIB
Organism
mmet  Methanococcoides methylutens
Pathway
mmet03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mmet00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MCMEM_1466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmet03021]
    MCMEM_1466
Transcription machinery [BR:mmet03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     MCMEM_1466
 Prokaryotic type
  Archaeal type
    TFB
     MCMEM_1466
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Sigma70_r4 DUF7577 RPA_interact_C Zn_ribbon_LysW Cas12f1-like_TNB Zn_ribbon_3 Zn_ribbon_PaaD Lar_restr_allev BRF2-like_C_cyclin_rpt HTH_Tnp_ISL3 HTH_AsnC-type Zn_ribbon_Elf1 Trm112p A2L_zn_ribbon Zn_ribbon_8 DZR DUF7573 Zn_ribbon_IS1595
Other DBs
NCBI-ProteinID: AKB85519
UniProt: A0A0E3X0B2
LinkDB
Position
complement(1602367..1603380)
AA seq 337 aa
MVEVERVRYSDTSEREKIRAMIKARKEKEKTAEVENKVIECPECGSRNLEQDYERAELVC
ADCGLVVDAEFVDEGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKS
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRTVRETAAVVYRKA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIGEVSRVSRKEIGRTYRFISRELALK
LMPTSPIDYVPRFCSGLNLKGEVQSRGVEILRQASEKELTSGRGPTGVAAAAIYIASILC
GERRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggtggaagttgaaagagtaagatattctgatacttcagagagagagaaaatacgtgca
atgatcaaggcacgtaaagagaaggaaaagaccgctgaagtcgagaacaaggttattgag
tgtcctgagtgtggaagccgtaatcttgaacaggactatgagcgtgccgaactggtatgt
gcagattgtggtcttgtagttgatgctgaattcgttgacgaaggtccggaatggcgtgct
tttgaccatgaccagcgtatgaaacgttctcgtgttggtgcaccaatgacatacaccata
cacgacaaaggtctgtctaccatgatcgactggaggaaccgtgattcctatggtaagtca
atctcctccaagaatcgtgcccagttatacaggttgagaaagtggcagcgtcgtatacgc
gtaagcaatgctactgaaagaaaccttgcattcgctttatcagaacttgaccgtatggca
tctgcattaggtcttccacgtaccgtacgtgagaccgctgcagtggtgtacaggaaagca
gttgacaagaacctcatccgtggaaggagtattgaaggtgtggcagcagcagcactttat
gcagcatgtcgccagtgcagtgttccaaggaccctggatgagatcggagaagtttcaagg
gtaagcaggaaagagatcggaagaacataccgtttcatttcccgtgagcttgcactcaag
cttatgccaacatccccaatagactatgtcccaaggttctgctcaggcctgaacctcaag
ggagaggtacagtccagaggtgttgagatccttcgtcaggcatctgaaaaggaactcaca
agtggccgtggaccaaccggtgtggcagcagctgcgatctatattgcatccattctctgc
ggtgagcgcaggactcagcgtgaggtcgctgatgttgcaggtgtgaccgaggtcaccatc
cgtaacaggtacaaagagctcgctgaagaactggacattgagatcattctctga

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