Methanococcoides methylutens: MCMEM_1522
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Entry
MCMEM_1522 CDS
T03913
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mmet
Methanococcoides methylutens
Brite
KEGG Orthology (KO) [BR:
mmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmet03016
]
MCMEM_1522
Enzymes [BR:
mmet01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MCMEM_1522
Transfer RNA biogenesis [BR:
mmet03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MCMEM_1522
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
AKB85575
UniProt:
A0A0E3X072
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All DBs
Position
1663495..1664550
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AA seq
351 aa
AA seq
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MKAEIINDRVLAEKKAVNELYNTGYYGRPKSKGLELTLIEAAYLAYRGKIDVEHNGNVLD
FPGFFKIASTLHPSFELKYIVYKDLRERGFYVQPGVTDFRVYPRGSHPGKGAAKQFVYVR
SERVPMPLKDLLRSLNAAENVRKQMILAIVDEESDITFYEVKRPRIKGGMGDSLYPDINT
EATFLEDRVIIWDEDASTALFENGFYGKPLDKQRLQLSLVESRYLMENGVINVRNRQDNV
MDSESFTDIASKIEPEFLLKNSVYTDLREKGVVPKTGFKFGSHFRVYAQVESPAKIPHSE
YLVHSIPSDHEFRLPVMSRAVRLANSVRKSMLYAVPEDDGIDYIDIGRVKM
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcagagataatcaatgaccgtgtgcttgcagagaagaaggccgttaatgagctt
tacaacacaggttattatggcaggccaaagagcaagggcctggaacttacacttattgaa
gctgcataccttgcataccgtggcaagatcgatgtggaacacaacgggaatgtacttgat
ttcccgggatttttcaagatcgcatcgacacttcatccatctttcgagctgaaatatatc
gtttacaaggacctcagggaaagagggttctacgtccagccgggagttaccgatttccgt
gtctatccgcgtggaagccaccccgggaaaggcgctgcaaaacagttcgtctacgtcagg
tccgaaagggtgccaatgccactcaaggaccttctcaggtcactgaacgcagcagaaaat
gtccgcaagcagatgatacttgctatcgtggatgaagaaagtgacatcacgttctacgag
gtgaaaagaccacggataaaaggcggaatgggagattcactttacccggacatcaatact
gaagcgacgttccttgaggacagggtaattatctgggatgaggatgcatccacagcactc
tttgagaacggtttctatggcaaaccacttgacaagcaaaggctccagctctcacttgtg
gaatcacgatacctgatggaaaatggtgttatcaatgtcagaaaccggcaggacaatgtg
atggacagcgagtcattcacagatatcgcttcgaagatcgagccggagttccttttgaag
aacagtgtttacacagacctccgtgagaaaggagtagttccaaaaacaggattcaagttc
ggcagccatttccgtgtctatgcacaggtggaatcccctgcaaagatacctcactctgaa
tatctggtacattcaattccttcagaccatgagttcagacttcctgtaatgtcaagggct
gtccgccttgctaacagtgtcaggaaaagcatgctatatgcggttcctgaagatgatggt
atcgactacattgatattggaagagtgaagatgtga
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