Methanococcoides methylutens: MCMEM_1644
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Entry
MCMEM_1644 CDS
T03913
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mmet
Methanococcoides methylutens
Pathway
mmet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCMEM_1644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmet03021
]
MCMEM_1644
Enzymes [BR:
mmet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCMEM_1644
Transcription machinery [BR:
mmet03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MCMEM_1644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AKB85697
UniProt:
A0A0E3ST43
LinkDB
All DBs
Position
complement(1786652..1787821)
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AA seq
389 aa
AA seq
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MSISEATIDSMIGGLPLPMTTLATLKKDVMEVGVTKKELEEIIERVMADYNYACVEPCEA
VGVVSAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKTPSTPMMTVALDEG
YATDRDLARKVAWEIEATHIAHLADVTTDLANMNLVVDLNEKMLIQRDISVDAIAEKLED
ELGVAVKIPSAVSNQIIVQPNEPSYRELLQLAKKIHTITLKGIEGIKRVVIRKDGEEYTL
YTEGSVLREVLNVEGVDITRTYTNNIGEIYEVFGIEAARNSIIKEASDTLREQGLTVDIR
HIMLVADIMTCDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGDVDELNGVTE
NIIVGQPIKLGTGDVHLVARNPLEDLGEQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcagtgaagcaactattgattccatgataggtggtcttccacttccgatgacc
acacttgcgaccctcaagaaagatgtaatggaggtcggtgttaccaagaaagagctcgaa
gagatcatcgagcgtgtaatggcagattataactatgcctgtgttgaaccatgtgaggct
gtgggtgttgtatccgcgcagtccattggtgagccgggtactcagatgaccatgcgtact
ttccactacgctggtgtcgcagagatcaacgttacacttggtcttccacgtctgatcgag
atcgtggatgccaggaaaacaccaagtactcctatgatgacagttgctctcgatgaagga
tatgcaactgacagggatcttgcaaggaaggttgcctgggagatcgaagcaactcacatt
gcacatcttgcagatgttaccaccgatcttgcaaacatgaaccttgtcgttgacctgaac
gagaaaatgctcattcagagggacatctctgtagatgctattgcagagaagcttgaggat
gagcttggagttgctgtcaagatcccaagtgctgtgagcaatcagatcattgtccagcca
aatgagccatcatacagggaattacttcagctcgccaagaagatccacactattactctc
aaaggtattgaaggtatcaagagggtagttatcaggaaagatggcgaggaatatacactt
tatactgaaggctccgttcttagggaagttctcaacgttgagggtgttgatatcacaaga
acctacaccaacaacattggtgagatctatgaggtgttcggtatcgaagctgcccgaaat
tccatcataaaggaagcaagtgacactctgcgtgagcagggtcttactgttgatattcgt
cacatcatgcttgtggcagatatcatgacctgtgatggtgaagtaaaacagatcggtcgt
catggtatttccggagaaaaggccagtgtcttcgcccgtgcagcattcgaagttactgtg
aatcacctgctcgatgcaggaatgcgcggtgacgtggatgaacttaatggtgtcactgag
aacatcattgtcggtcagccaataaaacttggtaccggtgacgttcatcttgtggccagg
aatcctcttgaagacctaggggagcaatga
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