Methanococcoides methylutens: MCMEM_1879
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Entry
MCMEM_1879 CDS
T03913
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mmet
Methanococcoides methylutens
Brite
KEGG Orthology (KO) [BR:
mmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmet03016
]
MCMEM_1879
Enzymes [BR:
mmet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MCMEM_1879
Transfer RNA biogenesis [BR:
mmet03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MCMEM_1879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AKB85932
UniProt:
A0A0E3STG6
LinkDB
All DBs
Position
complement(2039050..2039595)
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AA seq
181 aa
AA seq
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MARIFVAVDLPEEFRDEVRGIQSRFSGLKLKLVDPELVHVTMKFIGEVKESAVPEVAEAL
GNVKCRPFDALIGGIGVFPKPKAPRVLWLGAEGNFELLHDEVESSLSKFRFKKDKKKFTA
HATLARIKFMPAGQKDEFLELLDELGDVELGKMVVDRISLKKSTLTPQGPIYETLHEVLL
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggccagaatatttgttgcagtcgatctgccggaggagttccgtgatgaggtccgtggc
atacaatcacgtttttccggtctgaaattgaaactggtggacccggaacttgtacatgtg
accatgaagttcatcggggaagtaaaggagtccgctgtaccggaggttgcggaagcattg
gggaatgttaagtgcaggccatttgatgcacttatagggggcatcggggtttttccaaaa
cctaaagctccaagggttctatggctgggtgcggaaggtaactttgagcttcttcatgat
gaggtcgaatcaagcctctcaaagttcaggttcaagaaagataagaagaagttcactgca
catgctacactggcaagaataaaatttatgcctgcaggccagaaggatgaattcctggaa
ctgcttgacgagctaggcgatgttgagcttggtaaaatggtggttgacaggataagtttg
aagaagagcactctgacccctcagggtcctatatatgaaacccttcatgaggtcctgctg
gaataa
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