Methanococcoides methylutens: MCMEM_2017
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Entry
MCMEM_2017 CDS
T03913
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mmet
Methanococcoides methylutens
Pathway
mmet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MCMEM_2017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmet03000
]
MCMEM_2017
03021 Transcription machinery [BR:
mmet03021
]
MCMEM_2017
Transcription factors [BR:
mmet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MCMEM_2017
Transcription machinery [BR:
mmet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MCMEM_2017
RNA polymerase III system
TFIIIB
MCMEM_2017
RNA polymerase I system
SL1/TIF-1B
MCMEM_2017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
AKB86070
UniProt:
A0A0E3X285
LinkDB
All DBs
Position
2183597..2184148
Genome browser
AA seq
183 aa
AA seq
DB search
MTEYNIKIENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVEDVHTVIGDMAKKLNGIGIETIAEPEITVQNIVASADLKAVLNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPENCEEGVEVVRQQLDNM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatataacatcaagatagaaaacgtggttgcgtccaccaaacttgctgaagaa
ttcgaccttacaaagatagaagcggaattcgaaggcgcagaatataacaagcaaaagttc
ccgggacttgtatatcgcgtttccgatccaaaggccgcattccttgtatttacatcagga
aaagtggtttgtacaggtgcaaagaacgttgaggacgtacacaccgtcatcggcgacatg
gcaaagaaactcaatggaattggtatcgagactattgctgaaccggagatcaccgtacag
aacattgtagcttcagctgaccttaaagctgtgctcaaccttaatgcgatcgctatcgga
cttggccttgagaacatcgaatacgagcctgagcagttcccgggacttgtttacaggatc
gatgagccaaaggttgtcgtacttatcttcagctccggaaaacttgtggtcacaggcgga
aagtcaccagagaactgcgaggaaggtgtcgaggtcgtaaggcagcagcttgacaacatg
ggacttttgtaa
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