Molossus molossus (Pallas's mastiff bat): 118620915
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Entry
118620915 CDS
T07221
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mmf
Molossus molossus (Pallas's mastiff bat)
Pathway
mmf03013
Nucleocytoplasmic transport
mmf03015
mRNA surveillance pathway
mmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118620915 (DDX39B)
09122 Translation
03013 Nucleocytoplasmic transport
118620915 (DDX39B)
03015 mRNA surveillance pathway
118620915 (DDX39B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmf03019
]
118620915 (DDX39B)
03041 Spliceosome [BR:
mmf03041
]
118620915 (DDX39B)
Enzymes [BR:
mmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118620915 (DDX39B)
Messenger RNA biogenesis [BR:
mmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118620915 (DDX39B)
Spliceosome [BR:
mmf03041
]
Complex C
Other components
EJC/TREX
118620915 (DDX39B)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118620915 (DDX39B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118620915
NCBI-ProteinID:
XP_036103863
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAENDVDNELLDYEDDEVETAAGGDGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR
KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI
SSYIEQTR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgatgtggacaatgagctcttggactatgaagatgatgaggtggagacc
gcagctgggggagatgggaccgaggcccctgccaagaaggatgttaagggctcctacgtc
tccatccatagctctggctttcgggacttcctgctcaagccagagttactccgggccatt
gttgactgtggctttgagcatccatcagaagttcagcatgagtgcatccctcaggccatt
ctgggaatggatgtcctgtgccaggccaagtcaggcatgggaaaaacggcagtgtttgtg
ctggccacactgcagcagctggagccagttactgggcaggtgtctgtgctggtgatgtgt
cacactcgggagctggcttttcaaatcagcaaggagtatgagcgcttctctaaatacatg
cccaatgtcaaggttgcagtgttttttggtggtctgtctatcaagaaggatgaagaggtg
ctgaagaagaactgcccgcatatcgtcgtggggacccctggccgcatcctagccttggct
cgaaataagagcctgaacctcaaacacattaaacactttatcttggacgaatgtgataag
atgctcgaacaactcgacatgcgtcgggatgtccaggaaatttttcgcatgaccccccat
gagaagcaggtcatgatgttcagtgctaccttgagcaaagagatccggccagtctgccgc
aagttcatgcaagacccaatggagatcttcgtggatgatgagacgaagctgacgctgcat
gggttgcagcagtactacgtgaaactgaaggacaacgagaagaaccggaagctctttgac
cttttggatgttcttgagttcaaccaggtggtgatctttgtgaagtctgtgcagcgttgc
attgccctggcccagctcctggtggagcagaacttcccagccatcgccatccaccgtggg
atgccccaggaggagaggctttctcggtatcagcagtttaaagattttcaacgacgaatt
cttgtggctaccaacctattcggccgaggcatggacattgagcgggtgaacattgccttt
aactacgacatgcctgaggattccgacacctacctgcatcgggtggccagagcaggccgg
tttggcaccaagggtttggccatcacgtttgtgtcagatgagaatgatgccaagattctc
aacgatgtgcaggatcgctttgaggtcaatattagtgagctgccggatgagatagatatc
tcctcctacattgaacagacacgataa
DBGET
integrated database retrieval system
