Molossus molossus (Pallas's mastiff bat): 118621965
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Entry
118621965 CDS
T07221
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
mmf
Molossus molossus (Pallas's mastiff bat)
Pathway
mmf04120
Ubiquitin mediated proteolysis
mmf04137
Mitophagy - animal
mmf04141
Protein processing in endoplasmic reticulum
mmf05012
Parkinson disease
mmf05014
Amyotrophic lateral sclerosis
mmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118621965 (PRKN)
04120 Ubiquitin mediated proteolysis
118621965 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118621965 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
118621965 (PRKN)
05014 Amyotrophic lateral sclerosis
118621965 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
118621965 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmf04131
]
118621965 (PRKN)
04121 Ubiquitin system [BR:
mmf04121
]
118621965 (PRKN)
03029 Mitochondrial biogenesis [BR:
mmf03029
]
118621965 (PRKN)
Enzymes [BR:
mmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
118621965 (PRKN)
Membrane trafficking [BR:
mmf04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
118621965 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
118621965 (PRKN)
Xenophagy
Other xenophagy associated proteins
118621965 (PRKN)
Ubiquitin system [BR:
mmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
118621965 (PRKN)
Mitochondrial biogenesis [BR:
mmf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
118621965 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Motif
Other DBs
NCBI-GeneID:
118621965
NCBI-ProteinID:
XP_036105312
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSATSILQLKEVVAKRQGVPADQLRVIFAGKELRNDLVVQSCD
LDQQSIVHVVLRPRREGLEMPTTLGDRPRGAAGASERDPESLTRVDFSSSVLPTDSVGLA
VILQDGTEKAGPPAGSPAGRPAHSSFYVYCKGPCEGVRPGKLRVRCSSCRQATLTLAQGP
SCWEDVLTPNRMSGECQSADCPGTRAEFFFKCSAHPTSDEETSVALNLITTNSRGVPCIT
CTDIRSPVLVFQCNYRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKE
LHHFRILGEEQYNRYQHYGAEECVLQMGGVLCPSPGCGAGLLPEPQQRKVTCEGGGGLGC
GLVFCRDCKEAYHEGDCSSLGPSEGSATQVYRVDAKAAEQARWEESSKETIKKTTKPCPR
CHVPVEKNGGCMHMKCPQPTCQLEWCWSCGCEWSRACMGDHWFDV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgtttgtgaggttcaactccagccatggtttcccagtggaggtcgattctgcc
accagcatcctccagctcaaggaggtggttgctaagcgacagggggttccagctgaccaa
ctgcgtgtgattttcgcagggaaggagctcaggaatgacttggtggtgcagagctgtgac
ctggaccagcagagcatcgtccacgttgtgctgagacctcggagagaaggcctagaaatg
cccaccacccttggggaccgtccccggggcgctgcgggggcctctgagagggaccccgag
agcttaactcgcgtggacttcagcagctcggtcctgccgaccgactcggtgggcctggcg
gtcattctgcaggacggcacagagaaggcgggcccgccagcaggaagccccgcaggcaga
ccggcccacagcagcttttacgtctattgcaaaggcccctgtgaaggggtgcggcctgga
aagctcagggtgcgctgcagcagctgccggcaagcaacgctcaccttggcccagggtcca
tcctgctgggaagatgtgttaaccccaaaccggatgagtggtgaatgccagtctgcagac
tgccctgggacaagagccgaatttttctttaaatgttcagcacacccgacctctgacgaa
gagacatcagtagccttgaacctgatcacaacaaacagccgaggcgtcccctgcataaca
tgcacggacatcaggagcccggtgctggttttccagtgcaactaccgccacgtgatttgc
ttggactgtttccacttatactgcgtgaccagacttaacgaccggcagtttgtccatgac
cctcagctcggctactctctgccttgtgtggctggctgccccaactccttgattaaagaa
ctccatcacttcaggattcttggagaagagcagtacaaccggtaccagcactatggcgct
gaggagtgcgtgctgcagatggggggcgtgctgtgccccagcccgggctgcggggccggg
ctgcttccggaaccacagcagaggaaggtcacctgcgaagggggcggcggcctgggctgc
gggctggtcttctgccgggactgtaaggaagcataccacgaaggcgactgcagcagcctg
ggcccctcggaaggatctgcaacccaggtctacagggtggatgcgaaggctgcagagcaa
gctcgctgggaagaatcctccaaagaaaccatcaagaagaccaccaagccctgcccccgc
tgccacgtgccggtggagaaaaacggagggtgcatgcacatgaagtgcccgcagcccacg
tgccagctggagtggtgctggagctgtggctgcgagtggagccgcgcctgcatgggtgac
cactggttcgacgtgtag
DBGET
integrated database retrieval system
