Molossus molossus (Pallas's mastiff bat): 118628473
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Entry
118628473 CDS
T07221
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mmf
Molossus molossus (Pallas's mastiff bat)
Pathway
mmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118628473 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmf03021
]
118628473 (PCF11)
03019 Messenger RNA biogenesis [BR:
mmf03019
]
118628473 (PCF11)
Transcription machinery [BR:
mmf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118628473 (PCF11)
Messenger RNA biogenesis [BR:
mmf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
118628473 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
118628473
NCBI-ProteinID:
XP_036115344
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MSEQTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDMQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKTPHQVPLQPEKNRPGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFIMNTLNQSDINKTSKTIPSEKPNSSKQEKNKSGEKITKKELD
QLDSKSKSKSKSPSPLKNKFSHTKDLKNQESECPRVSDMSKRDPRLKKHFQDKTDSKDDD
TKEKRKTAEKKDKDEHMKSSEHRLVGSRNKIVNGIVQKQDTIMEESEKQGTKPGRSSTRK
RSRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKTGKMRQSGCKQSHMEDFMPPS
REERNAKRSTKQDVRDPRRIKKTEDERPQETASQHSIKSGTEPKENIENWQSSKSNKRWK
SGWEENKSLQQGDDHSKSPHLRHRESWSSTKGILSPRTPKQQHRLSVDANLQIPKELTLA
SKRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKK
PLLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHAS
RNSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFN
DRFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPNKM
IFDGPNKLSPRIDGPPAPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPV
GTPLRFEGPIGQGGGGGFRFEGSPGLRFEGSAGGLRFEGPGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPAGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGMRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPVPASGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPG
PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGARFDNHPSQRLESVSFNQ
TGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQNFSNPLNRASGHYFD
EKNLQNSQFGNFGNLPAPMAVGNIQASQQVLTGVAQPVPFGQGQQFLPVHPQNPGAFVQN
PSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDTATAQVNEVAAQPPTEEEEDQN
EDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEEQIDTPPACTEESIATPTEIKTEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtaccgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcactcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgtcatgtaccttatggattctatc
gtgaaaaacgttggacgagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaagttacgttcc
acatgggatgaaatattcccattgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaagagccttcaacacctggtacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatgcaaaagaatcttacccaa
gaacaactaataaggcagcagttactggcaaaacaaaaacagttgttagaacttcagcag
aaaaagttggagcttgaactagagcaagctaaagcacaactggcagtttctcttagtgtt
cagcaagagacatccaacttaggtcctggatctgcaccatccaaattacatgtttcacaa
attcctcctatggcagttaaaactcctcatcaggttcctttgcaacctgagaaaaaccgt
ccaggtccatccttgcaaattcaggatttgaaaggaacaaaccgggatccccgtcttaat
aggatgagtcaacattcttctcatggaaaagatcaaagtcacagaaaagaattcataatg
aacacattaaaccaatctgatattaataagacaagtaaaactataccctctgaaaaacca
aattcatcaaaacaagaaaaaaataaatcaggtgaaaaaataaccaagaaagaacttgac
caattagattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattc
tcccacacaaaagacttgaaaaatcaagaatctgagtgcccaagggtgtctgatatgagc
aagagagatccaagattaaaaaaacattttcaggataagactgatagcaaagatgatgat
acaaaagagaagagaaaaactgcagaaaagaaggataaagatgagcatatgaaatcatct
gaacatagactggttggaagtcgaaataaaatcgttaatggcattgtacaaaaacaggat
acaataatggaagaatcagaaaaacagggaacaaaaccagggagatcaagtactagaaag
cgatcaagatcaagatcacccaagtctcggtcaccaattatacattctcctaagagaaga
gataggcggtcacccaaacgaaggcaaaggagcatgtctccaacctcgacacccaaaact
ggaaaaatgcgccaatcgggatgtaagcagtcacatatggaagactttatgccaccttcc
agggaagaaagaaatgctaagagaagtactaaacaggatgttcgagatccgaggcgaata
aaaaagactgaagatgaacgaccacaagaaactgccagtcagcattctataaaatcaggc
actgaaccaaaggagaatatagaaaattggcaaagttccaagtctaacaaacgatggaaa
tctggttgggaagaaaataaaagcttacaacaaggtgatgaccatagtaaatctcctcat
ctaaggcatagggaaagctggtcaagcactaaaggaatcttgtcacctcgaaccccaaag
cagcagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgca
agcaaaagagaattgcttcaaaagacgagtgaacgtttagcatctggtgaaattacacag
gatgagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaa
catagatgcaatgtacgagatagtcctacagaagaaaataaaggtggattaaaaaagaaa
cctctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggaca
caggttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccct
ttgactgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagt
aggaatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctt
tctcctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggaga
agacatgacgagcaagtctctgctaaaggtgtacgagaagagcagagatcaccattcaat
gatcgttttccacttaagcgtcctagatacgaagattctgataaaccatttgtagatagt
ccagcatcacgatttgccggccttgatacaaatcagcgacttacagcattagctgaagac
agaccattatttgatggacctagtaggccgtcagtaaccagagatggcccaaacaagatg
atttttgacggacctaataaattaagccctagaattgatggacctcctgcaccaggttct
cttcggtttgatgggtcacctggacagatggggggaggtggccctttgagatttgaagga
ccgcaaggtcagctaggaggtgggtgtcctttgagatttgaaggtcctccaggaccagta
gggacacctctgcggtttgaggggccaattggtcaaggaggtggcggtggttttcgcttt
gaaggttcccctggtcttaggtttgagggatctgcaggtggtctgcgatttgaaggacca
ggccagcctgtgggtggtctcaggtttgagggtcatcggggtcaacctgtgggtggtcta
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatcctcgaggt
cagcctgtaggtggacttagatttgagggaggtcatggtccatcaggagctgcaatcagg
tttgatggacctcatggtcagccagcaggtgggatcagatttgaaggtcctttgctacag
cagggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtatgaggttt
gagggacaacataatcaacttggtgggaaccttaggtttgagggtccacatggtcaacca
ggggttgggatcaggtttgagggacctttagtccaacaaggaggtggaatgaggtttgag
ggtcctgtaccagcaagtggcctgagaattgaagggcctctgggtcaaggtggtccaaga
tttgaaggttgtcatgctttaaggtttgatgggcaaccaggtcagccatcactcttacca
agatttgatggattacatggacagccaggtcctagatttgaaagaactggtcagccaggc
ccacagagatttgatggaccaccgggacagcaggttcaaccaagatttgatggtgtgcct
caaagatttgatggtccacaacaccagcaagcatcaaggtttgatattccccttggtctt
caaggcgcacgatttgacaatcatccttcacaaaggcttgaatcagtttctttcaatcag
actggtccgtataatgatccacctggcaatgcttttaatgccccatcccaaggactgcag
ttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatggaccacat
ggccctggaaatcagaatttctcaaatccccttaacagagcttctggacactattttgat
gaaaagaatcttcagaattctcaatttggaaactttggcaatttacctgctccaatggcc
gtaggaaatattcaggcatctcaacaggttctgactggtgttgctcagccagtaccattt
ggccaaggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaat
ccttcaggagcccttcctaaggcatatcctgataatcatctcagtcaggtggatgtaaat
gaattattttcaaaactgctaaaaacaggaattctcaaattatcccagcctgatacagct
acagcacaagtaaatgaagttgctgctcagcctcccactgaagaggaggaagatcaaaat
gaagatcaagatgttccagatcttaccaattttacaattgaagaattgaaacaacgttat
gatagtgttataaatcgactgtatactggtattcagtgttactcttgtggaatgaggttt
acaacatcacagacagatgtatacgcagatcacttggactggcattatcggcaaaataga
actgaaaaagatgttagcagaaaagtcactcatagacgttggtactacagtttaacagac
tggatagaatttgaggaaatagctgatctggaagaacgtgcaaagagccagttttttgaa
aaagtgcatgaagaagttgtactcaaaactcaggaagctgctaaagaaaaagagttccaa
agtgtacctgcagggccagctggagcagttgagagttgtgaaatctgtcaagaacaattt
gaacaatactgggatgaagaagaggaggaatggcatttaaagaatgctattagagtggat
ggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgt
acaccatctcccagcaagacaccagttgaaaaccctttgaatattatgttgaacattgtc
aaaaatgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacaaattgatacc
ccaccagcttgtacagaggaaagcatagcaacacccactgaaattaaaacagaaaatgat
acagtcgagtcagtttaa
DBGET
integrated database retrieval system
