Molossus molossus (Pallas's mastiff bat): 118641650
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Entry
118641650 CDS
T07221
Symbol
MTREX
Name
(RefSeq) exosome RNA helicase MTR4 isoform X1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
mmf
Molossus molossus (Pallas's mastiff bat)
Pathway
mmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118641650 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmf03019
]
118641650 (MTREX)
03041 Spliceosome [BR:
mmf03041
]
118641650 (MTREX)
03009 Ribosome biogenesis [BR:
mmf03009
]
118641650 (MTREX)
03016 Transfer RNA biogenesis [BR:
mmf03016
]
118641650 (MTREX)
Enzymes [BR:
mmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118641650 (MTREX)
Messenger RNA biogenesis [BR:
mmf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
118641650 (MTREX)
Spliceosome [BR:
mmf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118641650 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
118641650 (MTREX)
Ribosome biogenesis [BR:
mmf03009
]
Eukaryotic type
Pre-60S particles
Helicases
118641650 (MTREX)
Transfer RNA biogenesis [BR:
mmf03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
118641650 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
118641650
NCBI-ProteinID:
XP_036134925
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MADAFGDELFSVFEEDAAAAPAARKDKEKGKWKAPPGSAEKAGKRSDGNLQSESASVGKT
KRDADFEGTDEPIFGKKPRVEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPADEDY
SPLKPRVGRAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREK
QRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEV
MREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQ
PCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQK
GRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEE
VFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFAT
ETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEK
MSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVV
EKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKV
KNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSRESLKNAATEAAKPARPDE
KGEMQVVPVLVHLLSAISSVRLYIPKDLRPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDD
MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPHLETVYTLCEKKAQIAVDIKSAKRELKKA
RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSA
EQAAALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSF
KPHLMDVVHTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENK
FAEGITKIKRDIVFAASLYL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccttcggggacgagctcttcagcgtgttcgaggaggacgccgccgccgcg
cccgcagccaggaaggacaaggagaagggcaaatggaaggcgcccccggggtccgcggag
aaggctgggaaacgttctgatggtaacttacagtccgagtcagctagcgttggaaaaacc
aagagagatgcggatttcgagggcacagatgaacccatttttggaaagaagcccagggta
gaagagtcaataactgaagacttaagtttggcagacttgatgcccagagtgaaagttcag
tcagttgaaactgttgaagggtgtacacacgaggttgcacttcctgcagatgaagattat
tcaccacttaaacctcgagttgggagagctgcaaaggaatacccgttcattcttgatgct
ttccaaagagaagccattcagtgtgttgataataatcagtctgttttagtgtctgcacat
acgtcagcaggaaaaactgtttgcgctgagtatgccattgcattggccttgagggaaaag
cagcgagtaatatttaccagcccaatcaaggctctgagcaaccagaagtaccgcgaaatg
tatgaagagtttcaagatgttggtctgatgacgggagatgttactattaatcctacagca
tcttgtcttgttatgaccacagagattttgagaagtatgctgtatcgaggttctgaagtt
atgcgagaggttgcttgggtcatatttgatgaaattcattacatgagagattcagagcgt
ggagtagtatgggaagaaactattattttgcttcctgataatgtccactatgtctttctt
tcggctactattccaaatgcccgacaatttgctgaatggatttgccatttacataagcag
ccttgccatgtaatctacactgattaccggcctaccccgttgcagcactacatttttccc
gccgggggagacggcctgcacctcgtggttgatgaaaatggtgacttcagagaagataac
ttcaacactgccatgcaagttctccgagacgcgggcgatttggcaaaaggggatcagaag
ggtcggaaaggaggaacaaaaggaccatcaaatgtgttcaagattgtgaagatgattatg
gaaagaaattttcaacctgtaattattttcagttttagtaagaaagattgtgaagcctat
gcacttcaaatgaccaaattagatttcaacacagatgaagaaaagaagatggttgaagaa
gtattcagtaatgcaatagactgcttgtcggatgaagataaaaagctccctcaggttgaa
catgtgcttccccttttgaagcggggcattggtattcaccatggtggtttacttcctatt
ttgaaagaaactatagaaattctcttttctgaaggattgataaaggcattatttgcgacg
gaaacttttgctatgggaattaacatgccagctagaacagttttatttacaaacgccaga
aaatttgatgggaaagacttccgatggatttcctctggcgaatacattcagatgtctggc
cgtgctggcaggaggggaatggatgatagaggaatcgtgattctcatggtagatgagaag
atgagcccaacaatcggaaagcagctgcttaagggctcagctgaccccctgaatagtgct
ttccatttaacctacaacatggttttgaacttactgcgtgtagaagaaatcaatcctgag
tacatgttggaaaagtccttctaccagtttcagcattatagagcgattccaggcgtggtg
gagaaggtaaagaactcagaagaacaatataataagatagtaataccaaatgaagaaagt
gtggtcatctattataagattagacagcagcttgccaaactgggtaaagaaattgaagaa
tatattcacaaaccaaaatattgcttaccatttctacaaccaggtcgtttggtaaaggta
aagaatgaaggagatgattttggctggggagtagtagtgaatttctcaaaaaagtcaaac
gttaagcccaattctggtgaactcgaccctttgtatgtagtggaggtgcttctgcgctgc
agcagagaaagcttgaagaacgcagccacggaggctgccaagcccgccaggcctgacgag
aaaggggagatgcaggtggttccggttttggtgcatctcctgtctgctatcagcagtgtt
aggctgtacattcccaaagaccttcgacccctggacaacaggcagagtgttctcaagtca
atacaggaagtccagaaacgttttcctgatggtgttccactgctggatccaattgatgac
atgggcattcaggaccaggggctgaagaaggtcatccagaaagtagaggcttttgagcat
cggatgtattctcatcccctccacaacgacccgcacttggagactgtgtacacgctctgt
gagaagaaagcgcagattgcagtagacatcaagtctgcgaagcgagagctaaagaaagcg
agaaccgtcctgcagatggatgagctcaagtgtcgcaaacgtgttctgaggcgcctgggg
tttgccacttcttctgacgtcatagagatgaagggacgggtggcttgtgagatcagcagt
gccgacgagctcctgctcaccgagatgatgttcaacggcctcttcaacgacctgtctgcg
gagcaggccgccgccctgctgagctgcttcgtgttccaggagaactccagtgagatgccc
aaattaacagagcagttggcaggaccgcttcgtcagatgcaggaatgtgctaaacgaatt
gcaaaagtctcagcagaagccaagttggagattgatgaggaaacctacctgagctcgttc
aagcctcacttgatggatgtggtgcacacctgggccaccggggccacgttcgcccacatc
tgcaagatgaccgacgtcttcgagggcagcatcatccgctgcatgagacgcctggaggag
ctgctccgacagatgtgccaggcggcaaaagccatcgggaacaccgagctggagaacaag
ttcgccgaaggaatcaccaaaatcaagagagacatcgtgttcgctgccagcctgtatctg
tag
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integrated database retrieval system
