Methanothermobacter marburgensis: MTBMA_c01120
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Entry
MTBMA_c01120 CDS
T01297
Symbol
truD
Name
(GenBank) predicted tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mmg
Methanothermobacter marburgensis
Brite
KEGG Orthology (KO) [BR:
mmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmg03016
]
MTBMA_c01120 (truD)
Enzymes [BR:
mmg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MTBMA_c01120 (truD)
Transfer RNA biogenesis [BR:
mmg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MTBMA_c01120 (truD)
Prokaryotic type
MTBMA_c01120 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADL57721
UniProt:
D9PU23
LinkDB
All DBs
Position
114557..115804
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AA seq
415 aa
AA seq
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MLNAETYVTSTEGIGGRIRVHNRDFQVEELPLMEPSGSGPNTWIWMEKEDRTTLDVLLDI
ARELHLDRRRMGFAGMKDRNAVTRQWICVSNTDPEDVKGIEDRIRNVRFLKVTSNEKKLR
MGQLRGNRFRILIRGPEADDPLEKTRETLAELQEKGVPNYYGWQRFGSPRAITHLVGRAL
VHGDVKGAVDTYIGNPIEGESELVSRARRAYDMGDLEGAYELMPASLRYERMMLRVLIRD
LGKGELSEKSYITAVHALPKPLKRMFVHAYQSYLFNRVVSERAALGINSYLEGDIIIDNE
QHIIHDPDPREVEEMIINFEAHPTAPLYGSKVPLADGKPGEIERRILEEEGVSLPDFNSI
EVPKLGSHGMRRAIRFRIWDVSAALNPEGIKVEFSIPKGCYATSVLREIMKKDVA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacgcagaaacctacgtcacatcaacagaggggatcggtggaaggatccgggtg
cataacagggacttccaggttgaggaattaccgctcatggagccaagcggaagcgggccc
aacacctggatatggatggagaaggaggacagaacaaccctggacgtccttctggacatt
gcaagggaactgcacctggaccgaaggagaatgggattcgcagggatgaaggacaggaac
gcggtaaccaggcagtggatatgcgtcagcaacacagaccccgaggacgttaagggaata
gaggatagaataaggaatgtcagattcctcaaggtcacatccaatgaaaaaaagctcaga
atgggccagctaaggggtaacagattcaggattctcataaggggccctgaagctgatgac
ccccttgagaagacccgggagaccctggctgagcttcaggagaagggtgttccaaattac
tatggatggcagcgattcggaagccccagggcaatcacacacctcgttggcagggcactg
gtgcatggtgatgtgaagggtgcggtggacacctacattggaaacccaattgagggggaa
tccgagcttgtatcccgggcgagacgggcatatgatatgggggaccttgagggtgcatat
gaactcatgccggcctccctcaggtatgagaggatgatgctcagggttctcatcagggat
ctcggaaagggagaactctctgaaaagtcctatataaccgcggtacatgcacttccaaag
cccctcaagaggatgtttgtccatgcataccagtcctacctattcaacagggtggtcagt
gagagggcggctcttggcataaacagctaccttgagggtgacatcatcatagacaatgag
cagcacataatccatgacccggatccacgggaggtggaggagatgatcatcaactttgag
gcacacccaacagcgccactctacggtagcaaggtgccactggcagatggaaaacccggt
gagatcgagaggaggatactggaggaggagggtgtttcactccctgacttcaactccata
gaggtccctaagcttgggagtcatggcatgaggagggccataaggttcaggatatgggat
gtttcggccgccctaaaccctgagggaatcaaagtggagttttcaataccgaagggatgc
tatgcaacctctgttttaagggagataatgaagaaggacgttgcctga
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