Methanothermobacter marburgensis: MTBMA_c05260
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Entry
MTBMA_c05260 CDS
T01297
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase, subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mmg
Methanothermobacter marburgensis
Pathway
mmg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MTBMA_c05260 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmg03021
]
MTBMA_c05260 (rpoD)
Enzymes [BR:
mmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MTBMA_c05260 (rpoD)
Transcription machinery [BR:
mmg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MTBMA_c05260 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_9
Fer4_10
Fer4
Fer4_7
RNA_pol_L_2
Fer4_16
Fer4_4
Fer4_6
Fer4_2
HcgF
Fer4_8
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ADL58121
UniProt:
D9PV73
LinkDB
All DBs
Position
484465..485259
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AA seq
264 aa
AA seq
DB search
MDIALKEKTDTEMVFVVTGVTVPFINAIRRICMMEVPKLAIEYVNMYRNDARMFDEVLAH
RLGLVPLKADPEFIEGLKMPEECDCEEYCSECSVSFTLKKKGPGVVYSRDLLSETPAVEP
VYPDIPLVKLGDEDEVELEAVAQLGVGRDHAKWEPTTACAYKYYPMITFTEECDECLECV
DACPRGVLGDESGKPEVLDVENCSMCKSCVRACDKGAIIVGYEEGKFIFRIETDGSVDPQ
DVLLKACDILRDKAERVITFCEGG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggatattgctcttaaggaaaaaactgataccgaaatggtctttgtggtcactggcgta
accgttccattcataaacgccataaggaggatctgcatgatggaggtccccaaactggca
atcgagtacgttaacatgtacaggaacgacgccaggatgtttgatgaggtactcgcccac
aggcttggactggtacccctcaaagctgaccctgaattcattgagggcctgaaaatgcct
gaggagtgtgactgtgaggaatactgctccgaatgcagtgtatcattcacactcaaaaag
aagggtcccggtgtcgtctactcccgggatcttctatcagaaacacctgcagttgaacca
gtatatcccgatatccccctggtgaagcttggggatgaggatgaggttgaactggaggct
gttgcacagctcggcgtgggaagggatcatgccaaatgggagcccacaacagcatgcgca
tacaagtactaccccatgataacattcacagaggaatgcgatgagtgcctggaatgtgtg
gatgcatgtccaaggggagtccttggggatgaatcagggaaacctgaggtacttgacgtt
gaaaactgttcaatgtgcaagagctgtgtgagggcatgtgataaaggggccataattgtg
ggatatgaggaaggcaagttcatattcaggatagagaccgacggatcagttgaccctcag
gatgtccttcttaaggcatgtgacatcctcagagacaaggctgaaagggtaataacattt
tgtgaaggaggctaa
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