Methanothermobacter marburgensis: MTBMA_c06520
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Entry
MTBMA_c06520 CDS
T01297
Name
(GenBank) predicted ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmg
Methanothermobacter marburgensis
Pathway
mmg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTBMA_c06520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmg03019
]
MTBMA_c06520
03009 Ribosome biogenesis [BR:
mmg03009
]
MTBMA_c06520
Enzymes [BR:
mmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MTBMA_c06520
Messenger RNA biogenesis [BR:
mmg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTBMA_c06520
Ribosome biogenesis [BR:
mmg03009
]
Prokaryotic type
rRNA helicases
MTBMA_c06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ADL58247
UniProt:
D9PVJ9
LinkDB
All DBs
Position
complement(592058..593335)
Genome browser
AA seq
425 aa
AA seq
DB search
MKELKFSEFDISGEINRALDDMGFEGTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFTI
PLLENLEPERVPQALVICPTRELCLQVTDEIRRIGKYLNVRVLAVYGGQGIGGQIAELRR
GVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTM
LFSATISKPVLRIAERYMRSPQILRVEKKHSPRIDEFYFKTREEDKVELLDWILTSNDIR
MGLIFCNTKRRVQRLRKQLSRMGYSVDEIHGDLSQSKRERVMERFRKGRFNLLIATDVAA
RGIHVPDVEVVVNYDLPFENEYYVHRIGRTGRAGSSGKSFTLVVGREVHRLRRIQSFTGK
RIKKSNMPSPQEIRRGYEEDLVEVLRRNLKSKSYGDSELLGNLVSEGYSFRDISHALLDV
LESSK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaattcagtgaatttgatatctcaggggaaattaacagggcccttgat
gatatgggatttgagggtacaaccccaatccaggcacttacattacctgttacacttgat
ggtatggacgttgttggcgaggcccagaccgggaccgggaaaaccgctgcctttaccata
ccactgcttgagaaccttgaaccagagagggtcccccaggcacttgtgatctgcccgacc
cgtgaactctgtctgcaggtcaccgatgagataaggaggataggcaagtaccttaatgtg
agggtgcttgcggtctatggtggccagggtattggaggtcagatagccgaactcaggagg
ggcgtccatgttatcgtcgcaacaccaggaaggctcatagaccatatcgagaggggtact
gtggaccttggaggcatatccacggttgtgcttgatgaggccgatgaaatgctcaacatg
ggcttcatagatgacatagagaggatactatcccacgtccctgaaaggagacagaccatg
ctgttctctgcaaccatctcaaagccggtgctaaggatcgcagagaggtatatgaggagc
ccccagattctccgtgtagagaaaaagcacagccccaggatagatgaattctatttcaaa
accagggaggaggacaaggttgagctccttgactggatactgacatccaatgacatcaga
atgggcctcatattctgcaacaccaaaaggagggttcagaggctcagaaagcagcttagc
cgtatgggttactctgtggatgaaattcacggggatctatcacagtcaaagcgtgagcgt
gtcatggaacgcttcaggaagggaaggttcaacctcctcattgcaactgatgttgctgca
cggggtatacatgtgcctgatgtggaggtcgttgtcaactatgatctcccattcgagaac
gagtactatgttcacaggatagggcgtaccgggcgtgccggttcaagtggaaaatccttt
acactggttgttggaagggaggtccacaggttaaggcgaatccagtcctttacaggtaaa
aggataaagaagagcaacatgccatccccgcaggagataaggaggggttacgaagaggac
cttgtggaggtgctccgtagaaaccttaaatccaagagttacggtgactccgagctcctg
ggaaaccttgtgagtgagggttacagtttcagggatatctcacatgcccttctggatgtt
ctggagtcctcaaaatag
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