Methanothermobacter marburgensis: MTBMA_c10710
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Entry
MTBMA_c10710 CDS
T01297
Symbol
rpr43
Name
(GenBank) predicted exosome RNA binding protein
KO
K03679
exosome complex component RRP4
Organism
mmg
Methanothermobacter marburgensis
Pathway
mmg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTBMA_c10710 (rpr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmg03019
]
MTBMA_c10710 (rpr43)
Messenger RNA biogenesis [BR:
mmg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MTBMA_c10710 (rpr43)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MTBMA_c10710 (rpr43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N_2
KH_6
ECR1_N
KH_1
S1_RRP4
RRP40_S1
S1
KH_2
KH_PNO1_2nd
KH_KhpA-B
KH-I_KHDC4-BBP
GshA
Motif
Other DBs
NCBI-ProteinID:
ADL58665
UniProt:
D9PWR7
LinkDB
All DBs
Position
complement(995597..996460)
Genome browser
AA seq
287 aa
AA seq
DB search
MLLVNEKDLVVPGQVLAENDYYPGRGTFKEGKKICSSFVGLVSVRNKKINVIPLQSKYIP
KRGDVVIGEITDIRFSMWGLDINSPYSGLLPASEVFGKEKRELENVFDIGDVLLLRVVDV
DEVKKVKLGLKGRGLGKFRDGILVYITPTKVPRLIGKRGSMINMVKEKTHCDIVVGQNGV
VWIKGEPDMERIAERVILMIDREAHTSGLTDRVRELLDRLTGTEPKDLDEDDGSELAEPE
APVEDAEEMKEETENPDDLEEDEEELSEAEESGHEEVDDENNSEEQR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgttactcgtaaatgaaaaggacctggttgtcccaggtcaggttctggcagaaaatgat
tactacccgggcagggggaccttcaaagagggtaaaaaaatatgttcatcattcgttgga
cttgtttctgtcagaaataagaagataaacgtgataccacttcagagcaagtacatcccc
aaaaggggagatgtggtgatcggtgaaatcactgatataaggttctcaatgtggggcctg
gatataaactccccctacagcgggctcctgccggcgtcagaggttttcggcaaggagaaa
agggaacttgagaacgtctttgacataggcgacgtgctccttttaagggtagttgatgtg
gacgaggtcaaaaaggttaaactgggccttaagggccgcgggcttggaaagttcagggac
ggaattctggtatacataacaccaacaaaggttccaaggctcataggcaaaaggggatcc
atgataaacatggtcaaggagaagacccactgtgatatcgttgtgggccagaatggagtc
gtctggataaagggcgaacccgacatggagaggatagccgagagggttatattgatgata
gaccgtgaggcccacacatcaggactcacagaccgtgtaagggagcttctggacagactc
accggcactgaacccaaggacctggatgaggatgatgggtctgaattggctgaaccggag
gctccagttgaggatgccgaggagatgaaagaagaaacagaaaaccctgatgacctagaa
gaagatgaagaggaattatccgaggccgaagagtcagggcatgaagaagttgacgatgaa
aataattccgaggaacagaggtga
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