Methanothermobacter marburgensis: MTBMA_c16980
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Entry
MTBMA_c16980 CDS
T01297
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp PCNA
KO
K04802
proliferating cell nuclear antigen
Organism
mmg
Methanothermobacter marburgensis
Pathway
mmg03030
DNA replication
mmg03410
Base excision repair
mmg03420
Nucleotide excision repair
mmg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTBMA_c16980 (pcnA)
03410 Base excision repair
MTBMA_c16980 (pcnA)
03420 Nucleotide excision repair
MTBMA_c16980 (pcnA)
03430 Mismatch repair
MTBMA_c16980 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmg03032
]
MTBMA_c16980 (pcnA)
03400 DNA repair and recombination proteins [BR:
mmg03400
]
MTBMA_c16980 (pcnA)
DNA replication proteins [BR:
mmg03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MTBMA_c16980 (pcnA)
DNA repair and recombination proteins [BR:
mmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
MTBMA_c16980 (pcnA)
MMR (mismatch excision repair)
Other MMR factors
MTBMA_c16980 (pcnA)
TLS (translesion DNA synthesis) factors
Other TLS factors
MTBMA_c16980 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
Rad9
Rad1
PCNA_C
Hus1
Phage_Gene47
DNA_pol3_beta_2
PH_15
Motif
Other DBs
NCBI-ProteinID:
ADL59267
UniProt:
D9PYG9
LinkDB
All DBs
Position
complement(1545325..1546059)
Genome browser
AA seq
244 aa
AA seq
DB search
MFKAELNDPNILRTSFDAISSIVDEVQIQISAEGLRLDALDRSHITYVHLELKSELFDEY
VCDEPEKINVDTEELMKVLKRAKANDRVILSTDEGNLIVQFEGEAVRTFKIRLIDIEYET
PSPPEIQYENEFEVPFQLLKDSIADIDIFSDKITFRVDEDRFMASAEGEFGDAEIEYLHG
EKITKPARSVYSLDKIKEMLKADKFSETAIINLGDDMPLKLTLKMASNEGELSFLLAPRI
EAEE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcagaattgaatgatcctaacattttaaggacgagcttcgatgccatatca
tccattgttgatgaggttcagatacagatcagtgccgaaggcctgcgtctcgacgccctt
gacaggtcccatatcacatacgtgcaccttgaactgaaatctgaactgttcgatgaatat
gtctgcgatgaaccagagaaaataaacgtggatacagaggaactcatgaaggtcctcaag
agggccaaggcaaacgacagggttatactatcaaccgatgaggggaaccttatagtccag
tttgagggagaggcagtaaggaccttcaagataaggctgattgacattgaatatgaaacc
ccaagtcctcctgaaatccagtatgagaacgaatttgaggtgccattccagctcctcaag
gactcaatagcagatatagacatattctccgataagataacattccgtgttgatgaggat
cgcttcatggcatctgccgagggggaattcggagacgccgagatagaatatctccatggt
gaaaagataactaaacctgcaaggagtgtttactcacttgacaagataaaggagatgctc
aaggccgataagttcagtgagacagcaatcatcaacctgggagatgacatgccccttaaa
ctaacactgaagatggccagcaatgagggagagctgagtttcctccttgctccaagaatc
gaggcagaggaataa
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integrated database retrieval system
