Methanohalophilus mahii: Mmah_0004
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Entry
Mmah_0004 CDS
T01211
Name
(GenBank) Wyosine base formation domain protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
mmh
Methanohalophilus mahii
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmh03016
]
Mmah_0004
Enzymes [BR:
mmh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
Mmah_0004
Transfer RNA biogenesis [BR:
mmh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
Mmah_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Hydrolase
Hydrolase_6
Motif
Other DBs
NCBI-ProteinID:
ADE35542
UniProt:
D5E8N3
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All DBs
Position
3651..4583
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AA seq
310 aa
AA seq
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MASDLLPDIGTLIKKQGYRLAGSHSAVKTCLWMRRAVREEGECYKARFYGISSHRCLQMT
PTLCCNQRCLHCWRPVELDVPTPQKWDSPVEIMGSSIECQRNLISGFGGSASRELWQQAN
EPAHVAISLSGEPTLYPYLDELIEEFRSRGVSTFVVTNGTVPETIKRIKPSQLYMSLDAP
ERQTYMEVCSPKDPCLWDNINESLSILKNKECRTAIRITLIKGVNMFDVKGYADLIRKAQ
PDIIEVKAYMHLGFSRNRLERDAMPGHEEVLDFANQLGCELGYEVGDQVEISRVVMLFRD
GKFVASKLPV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagatttattacctgatattggtacattaattaaaaagcagggatacaggctt
gcaggatctcattcagctgtcaaaacatgtctgtggatgagacgggctgtgcgtgaggaa
ggagaatgttataaagcccgtttttatgggatttcatcccacagatgcctgcagatgacc
ccaacactgtgctgtaaccagcgttgcctgcactgctggaggccggttgagcttgatgtt
ccaacccctcagaaatgggattctccagtggaaataatggggtcttcaatagaatgtcaa
cgcaacctgatttccgggtttggaggttcggcctcaagagaattgtggcaacaggccaat
gagcctgcacatgtggctatctctttatccggtgaacctaccctttatccttatctggat
gaactgatagaagaattccgaagcagaggagtaagtacttttgtggtaaccaacggtact
gtccctgaaacgattaaacgcataaaaccttcccagctctacatgagcctggatgctcct
gaaaggcagacctatatggaagtttgttccccaaaggatccctgtttatgggataacata
aatgaatccctcagtatccttaaaaataaagaatgcaggactgctatccgtattactcta
atcaagggtgtgaatatgtttgatgtgaaaggttatgcggatcttatcagaaaggcacag
cctgatattattgaagtcaaagcctatatgcacctgggtttttccaggaaccggcttgaa
agggatgccatgccagggcacgaagaagtccttgattttgcaaatcagcttggctgtgaa
ttgggttatgaagttggcgaccaggttgaaataagtcgcgttgtcatgctttttcgtgat
ggaaaatttgtcgcttctaaactccccgtttga
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