Methanohalophilus mahii: Mmah_0005
Help
Entry
Mmah_0005 CDS
T01211
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
mmh
Methanohalophilus mahii
Pathway
mmh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Mmah_0005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmh03019
]
Mmah_0005
03012 Translation factors [BR:
mmh03012
]
Mmah_0005
Messenger RNA biogenesis [BR:
mmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Mmah_0005
Translation factors [BR:
mmh03012
]
Eukaryotic type
Release factors
Mmah_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_LysW
Zn_ribbon_TFIIB
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ADE35543
UniProt:
D5E8N4
LinkDB
All DBs
Position
4690..5937
Genome browser
AA seq
415 aa
AA seq
DB search
MAEQSAHEKYEFKKKLESLRNKKGRGTELISLYIPPDKQLSDVTSQLKTEHSQASNIKSK
VTRTNVQSAIDSLLSRLKYLKIPENGIVYFTGAVDIGADKTNMETTTIIPPQPLTIYKYH
CDSAFFLEPLEGMLKDAKTYGLLVLDRREATIGLLTGKHIEPYRNLTSTVPGKQRKGGQS
AQRFQQLRLIAIHDFYKRIGDAASEIFLTVDMKDFEGILLGGPSPTKEEFQSGEFLHHEL
QRKILGLFDVAYTDESGLQELVNAASERLQDLDLMVEKNLMQKFFKELVSDSGKAAYGEE
VVRQNLMIGAVEILLISEDLRSERIKVRCTDGDYEDNITRENQPDQKSVDDFGNCPKCGS
PLEVVERVDIVDELSDLSDQMGSEVAFISTDFEEGGQLLNAFGGIVAILRYNTGM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaatctgctcatgaaaaatatgaattcaagaaaaaacttgaatccctccga
aacaaaaagggaaggggtactgaactcatatccctttacataccacctgacaaacagctg
tccgatgtgacctcacagcttaagactgaacacagtcaggcttccaacattaaatccaag
gtcacaaggaccaatgtgcagtctgcaatagattccctgctttcccgtcttaaatatctt
aagatcccggaaaacggtatcgtttattttaccggagctgtggatataggtgcggacaaa
acgaatatggaaaccacaaccataattcccccccagccgctcacgatttataagtatcac
tgtgactctgcctttttcctcgaaccgctggaagggatgctcaaggatgccaagacctac
ggtttgcttgtgcttgacagaagggaagctacaattggtttacttacaggcaaacatata
gaaccctatcgtaaccttacctcaacagttcccggtaaacagaggaaaggtggtcagagt
gctcagcgtttccagcagcttaggcttatagcgatacacgatttctacaaacgtatagga
gatgcggccagtgaaattttcctgacggttgacatgaaggattttgagggaatattgctg
ggtggcccttccccgaccaaggaagaattccaatcaggagaattcctgcatcatgagctg
caaaggaaaatactgggactctttgatgtggcctacaccgatgaatcaggattgcaggaa
cttgtcaatgctgcaagtgagcgtctgcaggacctggacctgatggttgaaaagaatctt
atgcaaaagtttttcaaggaactggtatctgattccggaaaggctgcctatggtgaggaa
gttgtgcgtcagaacctgatgataggggccgtggagatactgctgatatccgaggactta
aggtctgaaagaataaaggtcaggtgtaccgacggggattatgaagacaacataacccgg
gaaaatcaaccggatcagaaaagtgtagatgactttggtaactgccctaaatgtgggtct
cccctggaagttgtcgaaagggtagatatcgtggatgaactctcggatctgagtgaccag
atgggaagtgaggtggctttcatatcaactgattttgaggaaggtggccagcttctcaat
gcttttggcggcattgttgctattttgcggtataatacaggtatgtaa
DBGET
integrated database retrieval system
