Methanohalophilus mahii: Mmah_0550
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Entry
Mmah_0550 CDS
T01211
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
mmh
Methanohalophilus mahii
Pathway
mmh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mmah_0550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmh03400
]
Mmah_0550
Enzymes [BR:
mmh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Mmah_0550
DNA repair and recombination proteins [BR:
mmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mmah_0550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Mso1_Sec1_bdg
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ADE36076
UniProt:
D5EA75
LinkDB
All DBs
Position
575488..576336
Genome browser
AA seq
282 aa
AA seq
DB search
MYSIPVSCFDLDHTLDCGQVFRWSKEDDWWHGVVQGDYVHAFYEQEAETLYIDSRLPVEF
FVKYFRLDDDLPYIFSSIDHDSYVHEAIAKYKGLRLVMQDPWECLVSYMIATASNIPRIM
KSIEKLSRLLGEEIVDGIYAFPEISTLAACCGEDLCDCSLGFRARRLVKAARMIESGELD
LWGLYDMDYFQAKKQLMNIEGIGDKVADCILLFSYGKMEAFPVDTHVDKVIRNYYSDSFE
GPYTKPKMAEWARSYFGYYCGYAQQYLFYQHRLEGKLGSGMD
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtataccggtttcatgctttgatcttgaccacactctggattgtgggcaggta
tttcgctggtcaaaagaagatgactggtggcacggtgtggtacagggagattatgtacat
gccttctatgaacaggaggcggagaccctttacattgattcccgtctccctgttgagttt
tttgtgaaatacttcaggctggatgatgacctgccctatatcttttcttcaatcgatcat
gattcctatgtccatgaagcaatagcaaaatacaagggtttgagattggtcatgcaggat
ccctgggaatgccttgtatcttatatgatagcaactgcttcgaatattccccgtattatg
aaatccatcgagaaactgtcccggctacttggagaggaaattgttgatggaatttacgcc
tttcctgaaatatctactcttgcagcctgttgtggtgaggatctttgcgactgcagtctg
ggtttcagggcacgccgacttgtcaaagctgccaggatgatagaatcaggggagttagat
ctgtgggggctgtatgatatggattattttcaagccaaaaagcaattgatgaatatagaa
ggcatcggggataaggtggctgattgtatcctccttttttcctatggaaaaatggaagct
ttccctgtagatacccatgttgacaaggtcatcagaaattattattccgatagttttgaa
ggaccttataccaaacccaaaatggctgagtgggcaagatcctattttggatattactgt
ggttatgcccagcagtatcttttctatcagcacaggcttgaaggtaaactgggcagtgga
atggattaa
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