Methanohalophilus mahii: Mmah_0796
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Entry
Mmah_0796 CDS
T01211
Name
(GenBank) ribosomal RNA-processing protein RRP41/SKI6
KO
K11600
exosome complex component RRP41
Organism
mmh
Methanohalophilus mahii
Pathway
mmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmah_0796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmh03019
]
Mmah_0796
Messenger RNA biogenesis [BR:
mmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Mmah_0796
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Mmah_0796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ADE36319
UniProt:
D5EAW8
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All DBs
Position
823878..824771
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AA seq
297 aa
AA seq
DB search
MSDKPERFIDDEGLRLDGRRVDEIRPMKVEMGVLSRADGSCYLEWGNNKVLAAVYGPREL
HPRRMQKPNEVLVRYKYNMASFSVEDRIRPGPSRRSTEISKVSGEAFEPVVMTQYYPGAV
IDVFAEVLQADAGTRTAAINAATLALADAGIPMKGLVSACAVGKVDGQLVLDLNKPEDNY
GQADLPVAMTQDGEITLLQMDGHLTPEELEEGLEMVKKGCQQIIEIQREALISRYGNEDE
EGEEAEEDSPEEVPESEEGEEEEGERDGSFDNEESEAENLDENEVTKEDEGEEDERQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaccggaacgttttattgatgatgagggtctccgccttgatggaaggcgt
gttgatgagatccgccccatgaaagtagagatgggtgtgctttcaagagccgatggctca
tgttaccttgaatggggaaataataaggtgcttgcagcagtttatggcccccgtgaactg
cacccgagaaggatgcagaaacccaacgaagtacttgtgcgctacaaatataatatggct
tctttttctgtggaagacaggataagaccgggcccaagcagaaggagtaccgagatatcc
aaggtcagtggagaagcttttgaacctgttgtgatgacacaatattaccccggcgctgta
atagatgtattcgcagaagttttacaggccgatgcagggaccaggactgctgctattaat
gcagcaacacttgctcttgcagatgctggcatacccatgaaagggcttgtttcagcctgt
gcagtcgggaaagttgatggacagcttgtccttgatctcaacaaaccagaagataattat
ggtcaggccgatcttcctgtcgcaatgacccaggacggggaaataacccttctccagatg
gatgggcatcttactcctgaagaactcgaagagggcctggaaatggttaaaaaaggctgc
cagcaaattattgaaattcagcgtgaagcccttatttccagatatgggaatgaggatgaa
gagggagaagaagctgaagaggacagtccagaagaagtccctgaatctgaagaaggcgaa
gaagaggaaggagaaagggatggctcattcgacaatgaagaatctgaagccgaaaacctg
gatgaaaatgaagtaaccaaagaggatgagggtgaagaagatgagcggcagtga
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