Methanohalophilus mahii: Mmah_0797
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Entry
Mmah_0797 CDS
T01211
Name
(GenBank) ribosomal RNA-processing protein RRP42
KO
K12589
exosome complex component RRP42
Organism
mmh
Methanohalophilus mahii
Pathway
mmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmah_0797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmh03019
]
Mmah_0797
Messenger RNA biogenesis [BR:
mmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Mmah_0797
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Mmah_0797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ADE36320
UniProt:
D5EAW9
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All DBs
Position
824758..825543
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AA seq
261 aa
AA seq
DB search
MSGSEVISRLKRDYIYNLMLKGEREDGRQFNELRDIALETGIIDKAEGSAMVQYGDTQVM
VGVKMQVGTPFPDSPAEGVIITSMELNPIASPDFEAGPPREKAIEMGRIVDRGIRESGAI
DINKLCITEGEEVWMVFIDVHVLNNSGNILDAASLGAIAALMTTTVPSEREGKGEDYPMP
VREMPVGVSLVKIGDEMVLDPTYGEESVCETRITISSNQDGSICSMQKSGSGSLSPAQVV
KASKIAKEKGEIIREKYLLEI
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcagtgaggttatttccagactgaaaagagattatatttacaaccttatgctc
aagggtgaacgtgaagacggtcgccaattcaatgagctaagggatattgctcttgaaaca
ggcatcatcgataaagcagaaggttctgcaatggtacagtatggggatacccaggtaatg
gtgggtgtcaaaatgcaggttggtactcctttccccgacagtcctgcagaaggagttatc
ataacaagtatggaacttaatccgattgcttcacctgattttgaagcaggtcctcccaga
gaaaaagctatcgagatgggcaggattgtggatagaggaataagggaatctggcgcaata
gatataaacaagctctgtattacggaaggcgaagaggtatggatggttttcattgatgtt
catgttctgaacaattccggaaatatacttgatgctgcatccctgggtgcaatcgctgcc
cttatgaccacaacagtaccttctgaaagagaaggaaaaggtgaagattatcccatgcct
gtgcgtgaaatgcctgtgggtgtatcgctggtcaagattggtgacgaaatggtgttagac
cccacgtatggtgaagaatcggtatgtgaaacaagaattaccatttcctctaatcaggac
ggttcgatttgttcaatgcaaaaaagtggctcaggtagtttgtcaccggcacaggttgtt
aaggcaagtaagatcgcaaaggaaaaaggcgagattatacgagaaaagtatttattggaa
atatga
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