Methanohalophilus mahii: Mmah_1050
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Entry
Mmah_1050 CDS
T01211
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmh
Methanohalophilus mahii
Pathway
mmh03420
Nucleotide excision repair
mmh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mmah_1050
03430 Mismatch repair
Mmah_1050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmh03400
]
Mmah_1050
Enzymes [BR:
mmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmah_1050
DNA repair and recombination proteins [BR:
mmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mmah_1050
MMR (mismatch excision repair)
Other MMR factors
Mmah_1050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Cas_Cas4
DUF2800
ADDB_N
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADE36565
UniProt:
D5EBL4
LinkDB
All DBs
Position
complement(1079646..1082702)
Genome browser
AA seq
1018 aa
AA seq
DB search
MGDIKLNPSQSQAVDYTDGPLLILAGPGSGKTLTITEKVVNIVDEGFSPDRILALTFSEK
AAGEMEERIENRIGESSGITVSTFHSYCNDLLKEFSLYAGINQGTRLISQEHSHVWGINN
IDSFGFENIAIPNRPYDLITSLLEGVSQLHDHLVGPQELQEYVKRKLDENIDEQERDDLL
KLADLARFYSHYQEYKRDHNFMDYDDMISMVCRLLESNEVVRNQIRNRYDYVLVDEFQDT
NYAQLYLINLIADGTNLTCVADDDQCIYRFRGAYLSNIKQLQDYYASLEKIPLDRNYRSS
SQIVQLSQQLIATNPEREDKTLHSHNGDGEKIKVVKTPDDTSEANWVADEIQRLIEEENI
APDEIFVLTRKRADGKKYSDALKGKMIPVEYVGNLQLKNYPIVQEALAYMHIVADPFNNG
IAFARILAREGVSEHDLQKINTMAKKLSRETELEGDGIYSVLQHYLDDVPIIQKALVKSI
LTRLNELIDYRKNHLPSDTVKYLLSEKTDLYKSQLLADTFTSRRNIHILNSLTSMVEDLE
LVDGGSEFARAVEYLELVFNLDIGDEETSEENTVKVMTIHQSKGKEAKVVFVCDLADRHL
PLRFTKKQFRVPRELEKGVQRDVEDKILHLEEERRLAYVAMTRAREKLYLTFPEKYAGNK
RGVKPSEFVTQLDYESNPLIEYIETDRLQDTETVVTESPLKKKQDEYLRLMNMYAGQGQM
KQALESLVVLTQLKEIEDKGNLAVFNIEDFLKTTPRDIEELEALVNEEMPPLVDSDMRFS
ASKVRQYMECPLKFKYSNVLNIPIPQKTFFQTGTDVHSVFEQLSRYRMQGKSIDMELANR
ILDETWDGSVFDSQTHEQQELDRVRQMLEYWFEFEKSNVNETIAVEEKFNLKLDGAQFGG
VIDRIDQTPEGEYIVIDYKTSKSPLSKNKMPEDVQLALYCQAVRERYGKYPVKAGLMYVN
PNIRDLRLMDVNQSQINSVLDGVREIVADIKAEDFEIREEPNCYFCDYKGICEWYNHQ
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
ttgggagatattaaactcaatccttcacaatcacaagcagttgattatacagacgggcca
cttctcatactcgcaggtcctggctctggcaaaactttgaccattacggaaaaggtcgta
aatattgtggatgaaggcttttctcctgaccggatacttgctttaaccttctctgaaaag
gctgcaggggagatggaggagagaattgaaaaccgtattggagaatccagcggaattacg
gtatccacctttcattcctactgcaatgacctgctcaaggagttctccctgtatgctggc
atcaatcagggtaccagacttatctcacaggaacattcgcatgtctgggggataaacaat
atcgattcttttggttttgagaatattgcgatccccaacaggccctatgatctcattaca
agtttgctggaaggcgtttcgcagttacatgatcatctggtgggtccgcaggagttgcag
gagtatgtcaaacgaaagctggatgaaaacattgatgaacaagaaagggatgatctgctc
aaacttgccgatcttgccaggttctattcacattaccaggagtacaaacgggatcataat
ttcatggattacgatgacatgatctcaatggtatgtcgcctgctcgaaagcaatgaagtt
gttcgcaatcagatccgaaacagatatgattacgttttggtagatgaattccaggataca
aattatgcccagctctatcttatcaatctaattgccgatggcaccaacctgacctgtgtg
gccgatgatgaccagtgcatctacagattcaggggtgcctatctttccaatatcaaacaa
ctgcaggattactatgcatcccttgaaaaaatacccctggatcgcaattaccggtccagc
tcacagatagtacaattatcccagcaattgatcgcaacaaacccggaaagggaagataag
acgctgcattcccacaatggggatggagagaaaataaaggtggtaaaaacccctgatgac
accagtgaggccaattgggttgcagacgagattcagcggctgattgaagaagagaatatt
gcgcctgatgagatatttgttcttacccggaaacgtgctgacgggaaaaagtacagtgat
gcattgaaaggcaaaatgatccctgtggaatatgtgggcaacctgcagcttaaaaattat
cccattgtacaggaagccctggcctacatgcatattgtcgctgatcctttcaataatgga
attgcttttgccaggatattggcaagggaaggagtaagtgagcacgacctccagaagatc
aatacaatggcaaaaaaactcagccgggagactgaactggaaggagatggcatatattct
gtgctgcaacactatcttgatgatgtgccaataatacaaaaggcacttgtcaagtccatc
cttacccggctcaatgaactcatcgattacaggaagaatcatcttccctctgatactgtt
aaatatctgttatctgagaaaacggatctttacaaatcgcagttgcttgcagataccttt
acttccagaaggaatattcatatactcaattccctgaccagtatggtggaagatctggaa
cttgtggatggaggttctgaatttgccagggccgttgaatatctggaacttgtcttcaac
ctggatatcggggatgaggaaaccagtgaggaaaatactgtcaaggtcatgactatccac
cagtccaagggtaaggaagcaaaggttgtttttgtctgcgatctggctgaccggcatctg
cccctgagattcaccaaaaagcaattcagagttccccgggaacttgagaaaggtgtgcag
agggatgtggaggataagatcctgcacctggaggaagagcgcaggctggcctatgtagcc
atgacgcgggccagggaaaaactgtatctcacatttcctgaaaaatatgcaggtaacaaa
cggggtgtcaaacccagtgagtttgtaacacagttagattatgaatcaaatcccctgatt
gaatacattgaaactgacagattgcaggatactgaaactgttgtcacagaatctccattg
aaaaagaaacaggatgaatatctcaggcttatgaatatgtatgccggccagggccagatg
aagcaggcactggagtcactggtggtgcttacccagttaaaagagatagaggataaaggc
aatctggctgtttttaatattgaagactttttgaagactacacccagggatatagaggag
ctggaggcactggtcaatgaagaaatgccacctcttgtagattctgatatgcgtttttca
gcttctaaggtcaggcaatacatggaatgtcccctgaagttcaagtatagcaatgtactg
aatataccgattccacaaaagacattcttccagacaggaactgatgtgcattctgtgttt
gaacaactctccaggtacaggatgcagggcaaatccattgatatggaacttgccaatcgt
atcctggatgaaacgtgggatggttctgtttttgattcgcagacccacgagcagcaggaa
cttgaccgagtcaggcaaatgctggaatactggtttgagtttgagaaaagtaatgtcaat
gaaacgattgctgtggaggaaaagttcaatctgaaacttgacggagcacagtttggagga
gtgatagaccgcatcgaccaaactcctgagggcgagtatattgttatcgattacaagacc
agcaaaagtccattgagcaagaacaaaatgccagaggatgtacaacttgccctgtactgt
caggctgtcagggagaggtatggaaagtatccggtcaaagcagggctgatgtatgtcaat
ccgaacattcgggacctcagattaatggatgtgaaccaatcacagatcaattcagtactt
gatggtgtcagggagattgtggcagacatcaaagccgaggattttgagatcagggaagag
ccgaactgttatttctgtgattataaggggatttgtgaatggtacaaccatcaatga
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