Methanohalophilus mahii: Mmah_1224
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Entry
Mmah_1224 CDS
T01211
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmh
Methanohalophilus mahii
Pathway
mmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmah_1224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmh03019
]
Mmah_1224
03400 DNA repair and recombination proteins [BR:
mmh03400
]
Mmah_1224
Enzymes [BR:
mmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmah_1224
Messenger RNA biogenesis [BR:
mmh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmah_1224
DNA repair and recombination proteins [BR:
mmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mmah_1224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ADE36728
UniProt:
D5EC27
LinkDB
All DBs
Position
complement(1242040..1243839)
Genome browser
AA seq
599 aa
AA seq
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MRQTLYDYFGYDTFRPLQENIIQDVLNKKDVFVLMPTGGGKSLCYQLPSLLMEGVTVVVS
PLISLMKDQVDRLLSHGIAAAYMNSTLDNSEMSHVKDSLIRGKLDLLYVAPERLAMPSTL
KLLAKVNVNLFAVDEAHCISQWGHDFRPEYRKLGALRSGFPNVPLIALTATATPAVARDI
TKQLNMVRSEKYVASFNRSNLYYEVKSGENADQQITSYLRSHPESCGIIYCQTRKSVEGL
AGRLKKLGVNAAFYHAGMSDELRHRAQEKFLDGTIRVVVATVAFGMGIDKSNVRFVMHYD
LPADLESYYQQTGRGGRDGQPCDCILFFKRGDWYKQQYFIEQMSSKKEREIALSKLRHMM
DYCESVTCRRKILLEYFGESAESDCDYCDVCLNPPQQVDVTEDALIIFKCIKELNQKFGA
THVASVIAGSKAKKIVSSGHHRLHCHGNGSHNPQDYWKDLSHRLSSLGFLEVKGGRYPVL
KLNKKSRAVLNDGANVIIPQSSAATNTTKKISGQSKASSKSSPVDCEYAKLFEKLRRLRL
QFAKRDNVPPYIVFADTSLKQMASSKPQTANQMLTITGVGKCKMEKYGDAFLSEIKSFC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaaccctctacgactatttcggttatgacacatttcgacccctgcaggaaaat
attatccaggatgtcctgaataaaaaggatgtatttgtattgatgccaaccgggggtggc
aaatctttgtgttaccagttaccttccctgcttatggagggtgttaccgttgttgtgtcc
cccttgatatcccttatgaaagatcaggtcgacaggttgctttcacatggtattgccgct
gcctatatgaacagtacacttgataattctgaaatgagccacgttaaggattctctaata
agagggaaactcgatcttctctatgtggcccccgaaagactggccatgccatctactcta
aaattgcttgcaaaagtaaatgtaaatctttttgccgttgatgaagcacattgtatatcc
cagtgggggcatgatttcagacctgaatacaggaaattaggtgccttgcgctctggtttt
ccaaatgttcctttaatagcactcacagctactgctacccctgcagttgcccgtgatata
acaaaacaactcaatatggtcaggtctgagaagtatgtagcaagttttaatcggtccaac
ctttattatgaggttaaatccggggagaatgcagatcaacaaatcacatcatacctgcgc
tctcatcctgaatcctgtggaatcatctactgccagacacgaaaatccgtagagggactt
gctggcaggctgaaaaaattaggagtcaatgccgcattctatcatgcagggatgtcagat
gaactgagacaccgtgcccaggaaaagttcctggatggtactatcagggtagtagtggca
acagttgcctttggtatgggtatcgataagtccaatgtacgttttgtcatgcattatgac
ctgcctgcggatctggaaagttactatcagcaaaccggaaggggtggcagggacgggcaa
ccatgtgattgtatcctctttttcaaaagaggggactggtataaacagcaatatttcatt
gaacagatgtcttctaaaaaagaacgtgaaattgccctttccaagttacgccacatgatg
gattactgtgaatcagtcacctgcagaaggaaaatcttactcgaatacttcggagaatct
gccgaaagtgattgtgactattgtgacgtttgtcttaacccgccacagcaggtggatgtt
acagaagatgcattaataatttttaagtgcataaaagagttgaaccagaaattcggggca
acacatgttgcatcggtaattgcagggtcaaaggctaaaaaaattgtgtcaagtggccat
catcgactccattgtcatggtaatggttcccacaatccgcaagattactggaaagacctt
tcccatcggctctcttccctgggatttctggaagtgaagggtggaagatatccggtttta
aagttaaataagaaaagtcgtgcggttctcaatgatggtgctaacgtaattatacctcaa
tcatctgctgcaacaaatacgacaaaaaaaatatctggacagagcaaggcttcttcgaag
tcatctcctgttgattgtgaatatgcgaagttatttgaaaaactgcgcagactcaggttg
caatttgcaaaaagggataatgtgccaccctacattgtctttgcggataccagtttaaag
cagatggcctccagcaaaccccaaactgcaaaccagatgctcaccataacaggagtcggg
aaatgtaaaatggaaaaatacggtgacgcatttttgtcagagatcaaaagcttttgttga
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