Methanohalophilus mahii: Mmah_1584
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Entry
Mmah_1584 CDS
T01211
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mmh
Methanohalophilus mahii
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmh03016
]
Mmah_1584
Enzymes [BR:
mmh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Mmah_1584
Transfer RNA biogenesis [BR:
mmh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mmah_1584
Prokaryotic type
Mmah_1584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADE37080
UniProt:
D5E7E2
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All DBs
Position
1577463..1578779
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AA seq
438 aa
AA seq
DB search
MQVPDIEKQTGIDLYVTETEGIGGKLKQISEDFVVEEVTEREEGKEGKYLILELTKKNWE
THHLIRDMSRIMGISSKRFGFAGTKDKRALTTQRISIYDLEAEDIERIKLKDVNLKVLGS
SNKDVGLGDLVGNKFKIIVRDIDLPEEELDSRLLSITSTIRKLDGVPNFFGIQRFGSRRP
ITHLVGESIVRGDIEKAAIDYIGLSFPDEHEKTRLVRDRFYKERNYIESLKEYPVQLRYE
RAMMHYLVNNPDDFAGAFGELSSNMRNMFVHAYQSYIYNRIICRRIREKLPLNEAIEGDI
VCFKNKQGLPDTSRLETVTFSKVKGINNLIRRGRAFVTAPLIGTSTEFTNSAPGNIEKEI
LHETGVEQKDFRIPEIPRITSKGRRREILLNVKPAYTIEDDELNEGKKKVILEFCLPKGS
YATTILREYMKAEPADMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcctgatatagaaaaacaaaccggtatcgacctttatgtgaccgaaacagaa
ggtatcggcggaaagttgaaacaaattagtgaagattttgttgttgaggaagtcacggag
agggaggaaggcaaggaaggtaaatacctgatcctcgaacttacgaaaaagaactgggaa
acccaccacctgataagggacatgtcccgaattatgggaatcagttccaaaaggtttggt
tttgccggtaccaaggataaaagggcacttaccacccagcgtataagtatatacgacctt
gaggctgaagatattgaaaggataaaacttaaagatgtgaatttgaaagtactgggcagc
tccaacaaagatgtgggattgggagaccttgtgggaaataaattcaaaatcattgtccgg
gatattgacctgccagaggaggaacttgatagcagactcctgagtatcacttccacaata
agaaagcttgatggagtacccaactttttcgggatccagagatttggctcccgccgtccc
atcacccaccttgtgggagaatcgatagtaaggggagatattgagaaagctgcaatcgat
tatattggtttgagttttccagatgagcatgagaaaacaaggcttgtgcgagaccgtttc
tataaggagcgcaactatattgaaagcctgaaagaatatccggttcagttgcgctacgaa
agggcaatgatgcactatcttgtgaacaatccggacgattttgcaggagcattcggagaa
ttgagttccaatatgcggaatatgtttgtccatgcctaccagtcatatatctacaatcgg
ataatctgcaggagaatccgggaaaaactgcccctcaatgaagcaattgaaggtgatatc
gtgtgctttaagaataaacaggggctgcccgatacctcccggcttgaaactgtaacattc
tccaaggtaaaaggaatcaataatctgattcgcagaggcagagcttttgtgacagcccca
ctgatcggcacatccaccgaatttacgaacagcgcaccgggcaatatagaaaaagaaata
ctccatgagacaggtgttgaacagaaagatttccgtattcccgaaatccctcgtatcacc
tcaaagggcaggcgaagggaaatcctgttgaatgtcaaaccggcttacacaattgaagat
gatgaattaaatgaagggaagaaaaaagttatactggagttctgcctgcccaaaggaagt
tatgcgaccaccatcctcagggaatacatgaaagcagaacccgcagatatgagttaa
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