Mycobacterium marinum M: MMAR_0957
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Entry
MMAR_0957 CDS
T00694
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V (beta chain), RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mmi
Mycobacterium marinum M
Pathway
mmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MMAR_0957 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmi03400
]
MMAR_0957 (recB)
Enzymes [BR:
mmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MMAR_0957 (recB)
DNA repair and recombination proteins [BR:
mmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMAR_0957 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
PDDEXK_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACC39414
UniProt:
B2HSF6
LinkDB
All DBs
Position
complement(1169358..1172690)
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AA seq
1110 aa
AA seq
DB search
MRPFDLLGPLPAENSTTVLEASAGTGKTFALAALVTRYVAEGRARLDEMLLITFGRAASQ
ELRERVRCQMVDAVRVFHDSRNGSDDADPAGDNQLLAHLLDGTAAERDARQQRLRDALAG
FDAATIATTHQFCQLVLKSLGVAGDTDAGVTLVEDLDELVTEIVDDLYLVHFGRDRDDPP
LTYRDALRIARAVVANPSTQLRPLDAPPGSRAAICVGFAHHVLEELETRKRRRGILGYDD
LLLRLADALASEDSAARARMQQRWPVVMVDEFQDTDAVQWQVIDSAFSGRCTLILIGDPK
QAIYAFRGGDIVTYLHAAQTAGDKRTLATNWRSDSALVDRLQVVLRGAELGDPAIVVRDV
KAHHQGHRLAGAPHNDALRLRVVRRATLGRRGIQNLPIDILRDHIGRDLASDIGALLASG
ATFAGRALQANDIAVIVEKHKDARACHRALTDAGIHAVYTGDTDVFSSEAADDWLALLEA
FDQPHRPGIVRAAAATMFFGKTANDLARGGDALTDRVAETLREWADYARERGVAAIFEAA
QLGGMSDRVLSWQEGQRHMTDLAHVTQLLQKVSHRERYTLPALRDWLRGQREDRGGATER
NRRIDSDAAAVQIMTVWVSKGLQYPVVYLPFAFNRNIQERELVLFHDGGTRCLHIGGKDS
PDFGTVERLGAKEAANDDSRLTYVAMTRAQSQVVAWWSPAYDEPNGGLSRLLRGRRPGDS
VVPDRATPAKITDEDAWDRFQQWQAAGGPTVEESVIAAAPAIAGRPAPSELATRRFDRGI
DIRWRRTSYSGLIRMAEATGVSSEPEVTERDDEVAEVPLTEVVMSGPEQPSPMADLPSGA
KFGSLVHAVLETSDPFAIDLAAELESQIRVQSAWWPVQVPAAQLAAALVPMHDTPLGPLA
GGLTLRQIGLPDRLREMDFEFPLAGGDEADAGGHAPDLRLADVGALLRAHLDASDPLAPY
ADRLSGDALGGQSLRGYLSGSVDAVLRIPDGPGQRYLVVDYKTNWLGDPDRPLTAADYHR
PRLIEAMLHSDYPLQALLYTVVLHRFLRWRQPGYDPARHLGGVLYLFVRGMCGPDTPMLD
GHPAGVFSWSPPAALVTALSDLLDAGRAVA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccttcgatctgctcggcccattgcccgccgagaattccaccacggtgctcgaa
gccagcgccggaacaggcaagacattcgcgttggccgcgctggtgacccgctacgtcgcg
gagggacgggcccggctcgacgagatgctgctcatcaccttcgggcgggcggccagtcag
gaacttcgtgagcgggtccgatgccaaatggtcgatgcggtgcgggttttccacgactcc
cgcaacggctccgatgacgcggaccccgccggcgacaaccaactgctggctcacctgctc
gacggcaccgccgccgagcgcgacgcgcgtcagcagcgcctgcgcgacgcgctggccgga
ttcgatgcggcaaccattgccaccacacaccagttctgccagctggtgctcaagtctttg
ggcgtcgcgggtgacaccgacgcgggtgtgacgctggtcgaagacctcgacgagctggtc
accgagattgtcgacgatctctacctggtgcacttcggccgtgaccgcgatgaccccccg
ctgacctaccgcgacgcactgcggatcgccagggcggtggtcgccaacccgtccacccag
ctgcggccgctggatgcgccgcccggatcccgggccgcgatctgtgtcggtttcgcccat
cacgttctcgaagagctggaaacccgcaagcggcgtcggggcatcctcggctacgacgac
ctgctgctgcggctggccgatgccctcgccagcgaggactctgcggcccgggcgcgaatg
cagcagcgctggccggtggtcatggtcgatgagttccaggacaccgacgcggtgcagtgg
caggtgatcgacagcgcgttcagtgggcgctgcacactgattctcatcggcgaccccaag
caggccatctacgcattccgcggtggcgacatcgtcacctacctgcacgcggcgcaaacc
gccggggacaagcggacactggccaccaactggcgcagcgacagcgcgctggtcgatcgg
ttgcaggtggtgttgcgtggcgctgaactcggcgatcccgcaatcgtggtgcgcgatgtc
aaggcccaccaccagggccaccggctcgcgggcgcgccgcacaacgacgccctgcggctg
cgggtggtgcgccgggccacgttgggccgcaggggaatccagaacctgcccatcgatatt
ctgcgcgatcacatcggccgtgatctcgcctccgacatcggtgcgttgctggcctccggg
gcaacatttgccggcagagcactgcaggccaatgacatcgccgtgattgtcgagaagcac
aaggacgcgcgggcctgccatcgcgcgctcaccgacgccgggattcacgcggtctacacc
ggcgacaccgatgtgttcagctccgaagccgccgacgactggctagcgctgctggaggcg
ttcgaccagccgcatcgccccgggatcgtgcgcgccgccgccgcgacgatgttcttcggc
aagaccgccaacgatcttgcccgcggcggcgatgcgctcaccgatcgcgtcgcagagacc
ctgcgggagtgggcggactacgcccgcgagcggggggtggccgccatcttcgaggccgcg
cagttgggcggtatgagcgaccgcgtgctgtcgtggcaggagggccagcggcacatgacc
gacctggcccacgtgacgcagctgctgcagaaggtctcccaccgggagcgctataccctt
ccggcgctgcgagactggctgcgcggccagcgcgaggatcgcggtggcgctaccgaacgc
aaccgccggatcgatagcgacgccgcggccgtccagatcatgacggtgtgggtgagcaag
ggtctgcagtatccggtggtgtacctgccattcgccttcaaccgcaacattcaggaacgc
gaactggtgctgtttcacgacgggggcacgcgctgcctgcatatcggcggcaaggactcc
cctgatttcggcacggtcgagaggctgggcgccaaagaggctgccaacgacgacagccga
ttgacctacgttgcgatgacgcgggcgcagtcgcaagtggtggcctggtggtcaccggcc
tatgacgaacccaacggcgggctgtcacggctgctgcggggccggcgtcccggcgactcg
gtggtacctgaccgcgccacccctgccaagatcaccgacgaggatgcctgggaccggttt
cagcaatggcaggccgccggagggccgacggtggaagagtccgtcatcgccgcggcaccg
gcgattgccggccggccggcgccgtccgagctggccacccgccggtttgaccgcggcatc
gacatcaggtggcggcgcacgtcgtattcgggattgatcaggatggccgaggcgaccggc
gtcagcagtgagccggaggtgaccgaacgcgatgatgaagtcgccgaggttccgttgacc
gaggtggtgatgtccgggcccgagcagccttctcccatggcggatctcccatccggcgcg
aagttcggctcgctggtgcacgccgtgctggagaccagcgatcccttcgccatcgatctc
gccgccgagctggaatcccagatccgggtgcaatccgcgtggtggccggtgcaggtgccc
gcggcccagcttgccgcggcgttggtcccgatgcacgacaccccgctgggcccgctggcc
ggcggattgacgctgcgccaaatcgggctaccggaccgactgcgggagatggacttcgag
tttccgttggccggaggcgatgaggctgatgccgggggccacgcacccgatctccggctg
gccgacgtcggggcgctgttgcgggcgcacctggacgcatccgacccgctggcgccatat
gccgatcggttgagcggggacgcgcttggcggtcagtcgctgcgcggatatctcagcggt
tcggtcgacgcggtgttacggattcccgacgggccgggccagcggtatctggtcgtcgac
tacaagaccaactggctgggtgaccccgaccgcccgttgaccgccgccgactaccaccgt
ccccggctgatcgaggcgatgctgcactccgactatccgttgcaggcgttgctgtacacc
gttgtgctgcaccgttttctgcgctggcgccagccaggatacgatccggcccgacacctg
ggcggcgtgctgtacctgttcgtccgcgggatgtgtggtcccgacactcccatgctcgac
ggtcaccccgccggggtgttcagctggtcacctccggccgcactggtgacggcgttgtcc
gatctgcttgatgcgggcagggcggtcgcatga
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