Mycobacterium marinum M: MMAR_1248
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Entry
MMAR_1248 CDS
T00694
Symbol
sigF
Name
(GenBank) alternate RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mmi
Mycobacterium marinum M
Brite
KEGG Orthology (KO) [BR:
mmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmi03021
]
MMAR_1248 (sigF)
Transcription machinery [BR:
mmi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MMAR_1248 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
MarR_2
MarR
HTH_Crp_2
HTH_3
HTH_IclR
DUF7343
Sigma70_ECF
Peptidase_inhib_put
HTH_ParB
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ACC39706
UniProt:
B2HDZ0
LinkDB
All DBs
Position
1519716..1520504
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AA seq
262 aa
AA seq
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MTSRTAGGSSSRPNEYADVPEMFRELATFDADSPNFQRHRDTIVERCLPLADHIARRFEG
RGEPRDDLVQVARVGLVNAVVRFDVETGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGAATAELSQRLGRAPTATELAAELEMDRAEVVEGLVAGSSYNTLSIDSGSGSE
DDDARAIADTLGDMDAGLDRIEDRESLRPLLEALPERERTVLVLRFFDSMTQTQIAERVG
ISQMHVSRLLAKSLARLRDQLE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcccgaactgccggcggttcctcttcacgacccaacgaatacgccgatgtcccg
gagatgtttcgtgagttggccaccttcgatgccgactcaccgaatttccagcgccaccgc
gacacgatcgtcgagcgctgcttgccgttggccgatcacatcgcccggcggttcgaggga
cgtggcgaaccacgcgatgacctggttcaggtcgcgagggtcgggctggtcaacgcggtg
gtccgcttcgatgtcgagacgggttcggatttcgtctcgttcgcggtgcccaccatcatg
ggcgaggtccggcggcatttccgcgacaacagttggtcggtcaaggttccgcggcggctg
aaggaactgcatctgcggttgggcgcggccaccgccgagctgtcgcagcggctgggcagg
gcgcccaccgcgaccgaacttgccgccgagctcgagatggaccgagccgaggtagtcgag
ggcttggtagcgggcagctcctacaacaccttgtccattgacagcggtagcggtagcgag
gacgacgacgcccgcgctatcgcggacacgttgggtgacatggacgccggtttggatcgg
atcgaagatcgcgagtcgcttcgtcccttgctcgaggcgctgcccgagcgggagcgaacg
gtgctggtgctgaggtttttcgactcgatgacacaaacgcagatcgccgaacgggtgggc
atctcacagatgcacgtctcgcggctgctggccaaatccctggcgcggctgcgcgatcag
ctcgagtaa
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