Mycobacterium marinum M: MMAR_1359
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Entry
MMAR_1359 CDS
T00694
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmi
Mycobacterium marinum M
Pathway
mmi03420
Nucleotide excision repair
mmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMAR_1359
03430 Mismatch repair
MMAR_1359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmi03400
]
MMAR_1359
Enzymes [BR:
mmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMAR_1359
DNA repair and recombination proteins [BR:
mmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMAR_1359
MMR (mismatch excision repair)
Other MMR factors
MMAR_1359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
ACC39818
UniProt:
B2HFH3
LinkDB
All DBs
Position
1650700..1654005
Genome browser
AA seq
1101 aa
AA seq
DB search
MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY
AEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGTTVGVAVGEAAGAPTVSTYHAFAGSLLR
DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV
DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA
AKVMDFGMQMAAAARLAATCPQVGEELRSRYRVVLLDEYQDTGHSQRVALSALFGGGVDD
GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN
AISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP
PTAAVLVRRNADAAPIADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA
MRVLTGPRWRLGGSDVAALWRRAVALVGGPQVGASASPGAVAAAAGPDTDTACLADAICD
PGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAATASGAW
AGAEHLDAFADVVADYAERAAISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVAR
DRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALG
IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATG
LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPVAGERNPLLDDVVEAVWPTDPLA
TRRGDVERGARLVAEAISADAGVEAPAGGAAVADIEGWTADVDALLAERARAVGPPTRAL
PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDL
PGAADSDVGQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDG
GATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD
ELPDGMALAELLADSDPPCSC
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgttacagcccggatgagatagcaagtgcgctaggaattttcccgcccacc
gacgagcaggccgccgttatcgccgcccctccgggtccgttggttgtcatcgcgggcgcg
ggagcgggcaagaccgagacgatggccgcccgggtggtttggctggttgccaacggctac
gccgaaccaggccaggtgttgggcttgacgttcacccgcaaggctgccggccaattgctg
cgccgtgtccggtcgcggctggcccgattggcaggtaccaccgtgggtgtcgccgtcggc
gaagccgcgggtgcgcccacggtcagcacttatcacgcatttgccggctcactgctgcgt
gaccacggcttgttgctgcccatcgagcccgacacccggttgctcagcgagacagagctg
tggcagctggcgttcgaggtcgtcaacggatatcgcggtgagctgtgcacccagaagacc
ccggcggcggtcaccgccacggtgctgcggctgtggggccagctcgccgagcacctggtt
gacacccggcagcttcgcgatacccacatcgagctggaacggctcgtgcacgccctgccg
gcgggcccaaaccagcgcgatagcggcccgaatcagtggctgttgcggatgctggccacc
cagaccgagcgggccgagctggtgcccttgctcgacgcgttgcatgagcggatgcgcgcc
gccaaggtgatggacttcggaatgcagatggccgccgccgcacggctggcagcgacgtgc
ccgcaggtcggcgaggagctgcgcagccggtaccgcgtcgtgttgctcgacgagtaccag
gacaccggacactcccagcgcgtcgcgctgtcggcactgtttggtggcggcgtcgatgac
gggttggcgttgacggcagtcggtgatccgattcagtcgatctacggctggcgtggtgcc
tcggcgacgaacttgccccggttcagcacggatttcgcgctgtccgacggtgccccggca
ccggttctggagctgcggaccagctggcgcaacccgccgcgcgcactgcacctggcaaac
gcgatctcggcggaggcccgccggcggtcggtggccgtgcatgcactgcgttcgcgcccg
gatgcgccggccgggacggttcgttgtgcgctactcgccgatgtgcaggccgaacgggac
tggatcgcagaccaattgcagggtcactatcagcgcgcggcggccgacggggttagcccg
ccgacggcagcggtgctggtgcgccgcaacgccgacgccgcacccatcgccgatgcactg
gttgcgcggggaatcccggttgaggttgtcgggctggccggcctgttgtccattccggag
gtggccgacctggtagcgatgctgcgactggtgggtgacccgacggccggggccgcggcg
atgcgagtgttgaccggtccgcgctggcggttgggcggcagcgacgtcgccgcactttgg
cgacgggcggtcgcgttggtgggcggtcctcaggtgggcgcatcggcctctcccggcgcc
gtcgcggcggcggcgggtccggacaccgatacggcgtgtctggccgatgccatctgcgac
ccgggccccgccgactggtactcgtcggcgggctacgagcgcatcggtgcgctggcagcg
gaattgaacgccctgcgtgggcatcttggtcattggctgccggatcttgtcgccgaggta
cgacgcgtgcttgggctggattgcgatgtccgtgccgcggcgacggcttcgggggcatgg
gccggtgccgagcacctcgatgcgtttgccgacgtggtcgccgactacgccgagcgggcc
gccatctcggctggtagcgccctgtccaccaaggcatcggtggacggtctgctcgcctat
ctcgatgtcgcggcggaggtagagaacgggttaccgccggcccagttgacggtggcacgg
gaccgagttcaagtgctcaccgtgcatgccgcgaagggcctggaatggcaggtggtggcg
gtggcacatctatcggcaggtgttttcccgtcgaccgcgtcgcgaagcagttggctcacc
gatccgggcgagttaccgccgctgcttcggggggaccgggcgtcggtgggcgcgctgggc
atcccggtgctggatacctcggcggtgacaaaccgaaagcagttgtcggacaccatttcc
gcgcatcgggagcagctagatcagcggcgcgtcgatgaggagcgccggttgctctacgtc
ggcgttacccgggccgaggacaccgtgctggtatcgggtcaccactggggggccaccggg
ctgaagccgcgcggaccatcggacttcttgtgcgaactcaaggacatcatcgagcggtcg
gccgcggccggcgatccctgcgggacggtggatcagtgggatccggcaccggtcgctggt
gaacggaacccgctgctggacgacgttgtcgaagcggtttggccaactgatccgttggcc
acgcgacgcggcgatgtcgaacgtggggccaggttggtcgcggaggcgatctctgccgat
gccggtgtcgaggcccccgctggcggtgccgcggtcgccgatatcgagggctggacagcc
gacgtcgatgcgctgttggccgagcgggcgcgtgccgtggggccgccgacgcgagcgttg
ccgaaccagttgtcggtgagcgggctcgtcgagctggcccgcgacccggtaggggccagg
caacggttggtgcatcgcttaccgactcggccggatccgcatgcccagctgggcaatgcc
tttcacacatgggtacagcagttctacggcgcggagctgctgttcgacttgggggacctc
ccgggtgctgccgactccgatgtgggccaagtcgaggatcttgcgccgttgcaggaggcc
ttcgccggatctccttgggcggcgcgcacgccgatcgccgtcgaggtgccattcgaaatg
ccggtcggcgacaccgtggtgaggggccgcatcgacgcggtattcgaagaccccgatggc
ggcgcaaccgtcgtcgactggaagaccggtgagccgccgcgtgggcccgaagccatgcgg
caagccgccgttcagctggctgtgtaccggatggcgtgggctgccctgcgcggatgcccc
gaatcgtcggtgcgtaccgcctttcactatgtgcgcaccggagtcaccgtcatccccgat
gagctgcctgatgggatggcgttggccgagttgctcgccgactccgatccgccttgcagt
tgctaa
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