Mycobacterium marinum M: MMAR_1925
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Entry
MMAR_1925 CDS
T00694
Symbol
gpsI
Name
(GenBank) bifunctional protein polyribonucleotide nucleotidyltransferase GpsI
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmi
Mycobacterium marinum M
Pathway
mmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMAR_1925 (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmi03019
]
MMAR_1925 (gpsI)
03016 Transfer RNA biogenesis [BR:
mmi03016
]
MMAR_1925 (gpsI)
Enzymes [BR:
mmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MMAR_1925 (gpsI)
Messenger RNA biogenesis [BR:
mmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MMAR_1925 (gpsI)
Transfer RNA biogenesis [BR:
mmi03016
]
Prokaryotic type
tRNA degradation factors
MMAR_1925 (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
S1_RRP5
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-ProteinID:
ACC40374
UniProt:
B2HKV3
LinkDB
All DBs
Position
2339617..2341905
Genome browser
AA seq
762 aa
AA seq
DB search
MSVAETEEGVFEATATIDNGSFGTRTIRFETGRLAQQAAGSVVAYLDDENMLLSATTASK
NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVNGLR
NEIQVVVTILSLDPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIDGQWVAFPNVE
QLERAVFDMVVAGRIVGTEEDGTPDVAIMMVEAEATDKVIELVEGGAPAPTESVVAQGLE
AAKPFIAALCTAQQELADASGATAKTGAEYPVFPEYGDDVYYAVSSVATDGLAAALTIGG
KAERNQRTEEIKAEVLERLADTYEGREKEIGAAFRSLTKKLVRQRIVTDHFRIDGRGITD
IRALSAEVALVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFP
PFSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSV
CASTLALLNAGVPLKAPVAGIAMGLVSDDVEVDGKTERRFVTLTDILGAEDAFGDMDFKV
AGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDTPDEMSPYAPRVT
TIKVPVDKIGEVIGPKGKVINSITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIA
NPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLR
VEIADIDKRGKISLVLVAEDDDSAAAAAADSPAPADAATASS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctgaaactgaagaaggcgttttcgaagcaaccgccaccatcgacaacggg
agcttcggcacccgcaccatccgtttcgagactggccgattggcccagcaggccgccggc
tcggtggtcgcatacctcgacgacgagaacatgttgctgtcggcgaccaccgccagcaag
aaccccaaagagcatttcgacttctttccgctgaccgtcgatgtcgaagagcggatgtat
gccgccggccgcatccccggttcgttcttccgtcgtgagggccgcccctccaccgacgcg
atcctgacctgccggctcatcgaccgcccgctgcggccgtcgttcgtcaacggactgcgc
aacgagatccaggtcgtggtgacgatcctgagcctggaccccaacgacctgtacgacgtg
gtggcgatcaacgccgcgtcggcctcgacccaactggccgggctgccgttctccggtccc
gtcgggggcgtgcgggtggccctcatcgacggccagtgggtcgcattccccaacgtcgag
cagctcgagcgcgccgtgttcgacatggtggttgccggccggattgtcggcaccgaggaa
gacggcacgcccgacgtcgcgatcatgatggtcgaggccgaggccaccgacaaggtcatc
gagctggttgagggtggcgccccggcgccgaccgagagcgtggtcgcgcagggtctggaa
gcggccaagccgttcatcgcggcgctgtgcaccgcgcagcaggagctggccgacgcatct
ggggccaccgccaagaccggtgccgaatatccggtgttccccgaatacggcgacgacgtc
tactacgcggtgtcctcggtggctaccgatggactggccgcggcgttgaccatcggtggt
aaggccgaacgaaaccagcgcaccgaggaaatcaaggccgaggtgctcgaacggctggcc
gacacctacgagggccgggaaaaagagatcggcgccgcgttccgctcgctgaccaagaag
ctggtacggcagcgcatcgtcaccgatcacttccgcatcgacggccgcggcatcaccgac
attcgcgcattgtcggccgaagtcgccctggttccgcgggcccacggcagcgcgctgttc
gagcgcggtgagacccagattctcggcgtgaccacgctcgacatggtcaagatggcgcag
cagatcgactcgctggggccggagaccaccaagcggtacatgcaccactacaacttcccg
ccgttctccactggtgagaccggccgggtcggttcgcccaagcgacgggagatcgggcac
ggtgcgctggcggagcgggcgctgatgccggtgctgcccagcgttgaggaattcccgtac
gccattcgccaggtatccgaagcgctgggttccaacggctcgacctcgatggggtcggtg
tgcgcttcgacgctggcgctgctcaacgccggcgtgccgttgaaggcgccggtggccggt
atcgccatgggcctggtgtccgacgatgtcgaggtggacggcaagaccgagcgccgtttc
gtcaccttgaccgacatcctgggcgccgaagacgcgttcggtgacatggacttcaaggtc
gccggaaccaaggacttcgtcacggcactgcagctggacaccaagctcgatgggatcccg
tcgcaggttctggccggtgcgctggcccaggcgaaggatgcgcgcctgaccatcctcgag
gtcatggccgaggccattgacacgcccgacgagatgagcccgtacgcgcctcgggtgacc
accatcaaggttccggtggacaagatcggtgaggtgatcgggcccaagggcaaggtcatc
aactcgatcaccgaggagaccggcgcgcaaatctccatcgaggacgatggcaccgtgttc
gtcggcgccaccgacgggccgtcggctcaggctgccatcgacaagatcaacgccatcgcc
aacccgcaactgcctaccgttggtgagcggttcctgggcacggtggtcaagacgaccgac
ttcggtgcctttgtgtcgctgctgcccggtcgcgatggcctggtgcacatctccaagctg
ggcaagggcaagcgcatcgccaaggtcgaggacgtcgtcaatgtcggcgacaagctgcgg
gtggagatcgccgacatcgacaagcgcggcaagatctcgctggtgttggtggccgaggac
gacgattcagccgctgcggcggccgccgattccccggcgccggccgatgccgccacggca
agcagctga
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integrated database retrieval system
