Mycobacterium marinum M: MMAR_2369
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Entry
MMAR_2369 CDS
T00694
Symbol
dnaE1
Name
(GenBank) DNA polymerase III, alpha subunit, DnaE1
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmi
Mycobacterium marinum M
Pathway
mmi03030
DNA replication
mmi03430
Mismatch repair
mmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMAR_2369 (dnaE1)
03430 Mismatch repair
MMAR_2369 (dnaE1)
03440 Homologous recombination
MMAR_2369 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmi03032
]
MMAR_2369 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mmi03400
]
MMAR_2369 (dnaE1)
Enzymes [BR:
mmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMAR_2369 (dnaE1)
DNA replication proteins [BR:
mmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MMAR_2369 (dnaE1)
DNA repair and recombination proteins [BR:
mmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MMAR_2369 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ACC40818
UniProt:
B2HQ75
LinkDB
All DBs
Position
2856907..2860449
Genome browser
AA seq
1180 aa
AA seq
DB search
MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA
TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL
FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK
WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL
LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT
PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF
LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPD
IDIDFDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI
TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG
VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI
ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA
VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA
QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY
AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP
DVNESLVNFASVGQDIRFGLGAVRNVGANVVGSLIGTRSGKGKFTDFSDYLNKIDISACN
KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF
TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV
RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV
AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL
RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcttcttcgcggtcctttgtgcacctgcacaaccacaccgagtactcgatg
ctggatggtgcggcgaagatcacccccatgctggccgaggtggaacggctggacatgccc
gcgatcgggatgaccgaccacggaaacatgttcggcgccagcgagttctacaactcggca
accaaggccggggtgaagccgatcatcggcgtcgaggcgtatgtagctcccggctctcgt
ttcgatacccgtcgcatcacctggggtgatcccagccagaagggcgacgacgtatccggt
agcggctcttacacccacctgacgatggtggccgagaacgcgaccggcctgcgcaacctg
ttcaagctgtcgtcactggcctcgttcgagggtcagctcggtaagtggtcgcgcatggat
gccgaacttgtcgccgagcacgccgagggcatcatcgccaccaccggctgcccctccggt
gaggtgcagacccggctgcggctgggccatgaccgcgaagcgctggaatcggccgccaag
tggcgggagattttcggcgccgacaactacttcctcgagttgatggatcacggactgtcc
atcgaacgccgcgtccgtgagggtctgatcgagataggccgcaagctcgacattccgccg
ctggccaccaacgactgccattacgtcactcgcgacgccgcgcacaaccacgaggcgctg
ctgtgtgttcagaccggcaagacgctctcggaccccaaccggttcaagttcgacggtgac
gggtactacctcaagtccgccgccgagatgcgccaactctgggacgacgacatcccgggc
gcctgcgactccaccctgctgatcgcggagcgagtgcagtcctatgccgacgtatggacc
ccgcgtgaccggatgccgatcttcccggtgcccgaggggcacgatccggcgtcgtggctg
catcacgaggtgatggccggcctgcggcgacgtttcccgtccggtctcggccaggactac
atcgatcgggctgagtacgagatcaaggtgatctgcgacaagggtttcccgtcgtacttc
ctgatcgtggccgacctgatcaactatgcgcggtcggtcgacattcgagtgggaccgggg
cgtggttcggcggccggctcgctggtggcctacgcgatgggcatcaccaacatcgacccg
ataccgcacggtctgctgtttgagcggttcctcaacccggagcgcccgtcagcgcccgat
atcgatatcgacttcgacgaccgccgtcgcggcgagatggtgcgctacgccgccgacaag
tggggccaggatcgagtcgcccaggtcatcaccttcggcaccattaagaccaaggcggcg
ctgaaggattccgcgcgtatccactatggccagcccgggttcgcgatcgccgaccgaatc
accaaagcgttgccgccgccgatcatggccaaggacattccgctgtccggcatcaccgac
ccggcccacgagcggttcaaggaggccgcggaggttcgcggcctcatcgagaccgacccc
gacgtccgcaccatctaccagaccgcgcgcgggctggaaggcctgatccgtaatgcgggc
gtgcacgcgtgtgcggtgatcatgagcagcgaacccctgacggaggccattccgctgtgg
aagcggcctcaagacggggccatcatcaccggctgggactacccgtcgtgtgaggcgatc
ggcctgttgaagatggacttcttgggcctgcgaaacctgacgatcatcggcgacgcgatc
gagaacatcaaggccaaccggggaatcgacctcgacctggaatcgctgccgctcgacgac
aagcccacctacgagctgttgggacgcggtgagacgctgggcgttttccagctcgacggc
gggccgatgcgcgacctgctgcgtcgcatgcaacccaccgagttcaatgacatcgtcgcc
gtcctggcgctgtaccggccaggcccgatgggcatgaacgcccacaacgactatgccgac
cggaagaacaatcgccaggcggtcaagccgatccaccccgagctggaggagccgctgcgc
gaaatcctctcggagacctacggtctgatcgtctatcaagagcagatcatgttcatcgcc
caaaaggtcgcctcctacacgatgggtaaggccgacgcgctgcgcaaggcgatgggcaag
aagaagctcgaggtgctcgaggcggaatacaagggcttctacgaaggcatgaccgccaac
ggattctctgaaaaagcggtcaaggcgctgtgggacaccatcctgccgttcgccggatac
gccttcaacaagtcgcacgccgcgggctacggtctggtctcgtattggaccgcctatctg
aaggccaactacccggccgagtacatggccgggttgctgacctcggtcggtgacgacaag
gacaaggccgcggtctacctggccgattgccgcaagctcggcatcaccgtgctaccgccc
gatgtcaacgagtcattggtgaacttcgcctcggtcgggcaggacatccgcttcgggttg
ggtgcggtgcgcaatgtcggggccaacgtcgtcggttcgttgatcggtacccgcagcggc
aaaggcaaattcaccgacttctccgactacctgaacaagatcgacatctcggcctgcaac
aagaaagtcaccgagtcgctgatcaaggcgggggcgttcgactcgctcgggcacccgcgc
aaaggcctcttcctggtgcacaccgacgccgtggactcggtgctgggtaccaagaaggcc
gaggcgatgggacagttcgatctcttcggcggcagcgactcgggtgccgacgcggtgttc
accatcaaggttcccgaggacgagtgggaagacaaacataaactcgcactggaacgcgag
atgctgggcctgtacgtgtcggggcatccactcaacggggtggcacatctgttggccgcc
caggttgataccgcgatcccggcaatcctggatggtgatgtctccaacgatgcccaggtg
cgggtgggtggcatcctggcggccgtgaaccggcgggtcaacaagaacgggatgccttgg
gcatcagctcaattggaagatctcaccggtggtatcgaggtgatgttcttcccgcacacc
tactccaactatggcgccgatatcgccgacgacgccgtggtgctggtcaacgccaaggtc
gcgattcgcgacgaccgcatcagcttgatcgccaacgagctcgtggtgcccgatttttcc
aatgcccaggcggatcggccgctggccgtgagcctgcccacccggcagtgcaccatcgac
aaggtcaccgcactcaaacaggtgctggctcggcacccgggtacgtctcaggtgcatctg
cggctgatcagtggggatcggatcaccacgctggagctcgaccagtcactacgggtcacg
ccatcgccggcgttgatgggcgatctgaaagagctgctcggtcccggctgcctgggcagc
tga
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integrated database retrieval system
