Mycobacterium tuberculosis variant microti: RN08_0005
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Entry
RN08_0005 CDS
T04291
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mmic
Mycobacterium tuberculosis variant microti
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmic03032
]
RN08_0005
03400 DNA repair and recombination proteins [BR:
mmic03400
]
RN08_0005
Enzymes [BR:
mmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RN08_0005
DNA replication proteins [BR:
mmic03032
]
Prokaryotic type
DNA Topoisomerases
RN08_0005
DNA repair and recombination proteins [BR:
mmic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RN08_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AMC57432
LinkDB
All DBs
Position
5123..7267
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AA seq
714 aa
AA seq
DB search
MGKNEARRSALAPDHGTVVCDPLRRLNRMHATPEESIRIVAAQKKKAQDEYGAASITILE
GLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDG
RGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKR
DGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLN
KGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVKSRTFHYPGGLVDFV
KHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFR
SALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQTKTKLGNTEVK
SFVQKVCNEQLTHWFEANPTDSKVVVNKAVSSAQARIAARKARELVRRKSATDIGGLPGK
LADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTE
VQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHV
FLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKEL
WETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVRFLDV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaacgaggccagaagatcggccctggcgcccgatcacggtacagtggtgtgc
gaccccctgcggcgactcaaccgcatgcacgcaacccctgaggagagtattcggatcgtg
gctgcccagaaaaagaaggcccaagacgaatacggcgctgcgtctatcaccattctcgaa
gggctggaggccgtccgcaaacgtcccggcatgtacattggctcgaccggtgagcgcggt
ttacaccatctcatttgggaggtggtcgacaacgcggtcgacgaggcgatggccggttat
gcaaccacagtgaacgtagtgctgcttgaggatggcggtgtcgaggtcgccgacgacggc
cgcggcattccggtcgccacccacgcctccggcataccgaccgtcgacgtggtgatgaca
caactacatgccggcggcaagttcgactcggacgcgtatgcgatatctggtggtctgcac
ggcgtcggcgtgtcggtggttaacgcgctatccacccggctcgaagtcgagatcaagcgc
gacgggtatgagtggtctcaggtttatgagaagtcggaacccctgggcctcaagcaaggg
gcgccgaccaagaagacggggtcaacggtgcggttctgggccgaccccgctgttttcgaa
accacggaatacgacttcgaaaccgtcgcccgccggctgcaagagatggcgttcctcaac
aaggggctgaccatcaacctgaccgacgagagggtgacccaagacgaggtcgtcgacgaa
gtggtcagcgacgtcgccgaggcgccgaagtcggcaagtgaacgcgcagccgaatccact
gcaccgcacaaagttaagagccgcacctttcactatccgggtggcctggtggacttcgtg
aaacacatcaaccgcaccaagaacgcgattcatagcagcatcgtggacttttccggcaag
ggcaccgggcacgaggtggagatcgcgatgcaatggaacgccgggtattcggagtcggtg
cacaccttcgccaacaccatcaacacccacgagggcggcacccacgaagagggcttccgc
agcgcgctgacgtcggtggtgaacaagtacgccaaggaccgcaagctactgaaggacaag
gaccccaacctcaccggtgacgatatccgggaaggcctggccgctgtgatctcggtgaag
gtcagcgaaccgcagttcgagggccagaccaagaccaagttgggcaacaccgaggtcaaa
tcgtttgtgcagaaggtctgtaacgaacagctgacccactggtttgaagccaaccccacc
gactcgaaagtcgttgtgaacaaggctgtgtcctcggcgcaagcccgtatcgcggcacgt
aaggcacgagagttggtgcggcgtaagagcgccaccgacatcggtggattgcccggcaag
ctggccgattgccgttccacggatccgcgcaagtccgaactgtatgtcgtagaaggtgac
tcggccggcggttctgcaaaaagcggtcgcgattcgatgttccaggcgatacttccgctg
cgcggcaagatcatcaatgtggagaaagcgcgcatcgaccgggtgctaaagaacaccgaa
gttcaggcgatcatcacggcgctgggcaccgggatccacgacgagttcgatatcggcaag
ctgcgctaccacaagatcgtgctgatggccgacgccgatgttgacggccaacatatttcc
acgctgttgttgacgttgttgttccggttcatgcggccgctcatcgagaacgggcatgtg
tttttggcacaaccgccgctgtacaaactcaagtggcagcgcagtgacccggaattcgca
tactccgaccgcgagcgcgacggtctgctggaggcggggctgaaggccgggaagaagatc
aacaaggaagacggcattcagcggtacaagggtctaggtgaaatggacgctaaggagttg
tgggagaccaccatggatccctcggttcgtgtgttgcgtcaagtgacgctggacgacgcc
gccgccgccgacgagttgttctccatcctgatgggcgaggacgtcgacgcgcggcgcagc
tttatcacccgcaacgccaaggatgttcggttcctggatgtctaa
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