Mycobacterium tuberculosis variant microti: RN08_0224
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Entry
RN08_0224 CDS
T04291
Name
(GenBank) multidrug ABC transporter ATPase/permease
KO
K18894
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
mmic
Mycobacterium tuberculosis variant microti
Pathway
mmic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RN08_0224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmic02000
]
RN08_0224
Transporters [BR:
mmic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RN08_0224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Zeta_toxin
AAA_25
AAA_29
SMC_N
AAA_16
AAA_22
RsgA_GTPase
AAA_33
Ploopntkinase3
AAA
ABC_ATPase
AAA_18
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AMC57651
LinkDB
All DBs
Position
227471..231055
Genome browser
AA seq
1194 aa
AA seq
DB search
MRTNCWWRLSGYVMRHRRDLLLGFGAALAGTVIAVLVPLVTKRVIDDAIAADHRPLAPWA
VVLVAAAGATYLLTYVRRYYGGRIAHLVQHDLRMDAFQALLRWDGRQQDRWSSGQLIVRT
TNDLQLVQALLFDVPNVLRHVLTLLLGVAVMTWLSVPLALLAVLLVPVIGLIAHRSRRLL
AAATHCAQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLVTASRALYAAQLRVARLNA
HFGPLLQTLPALGQMAVFALGGWMAAQGSITVGTFVAFWACLTLLARPACDLAGMLTIAQ
QARAGAVRVLELIDSRPTLVDGTKPLSLEARLSLEFQRVSFGYVADRPVLREISLSVRAG
ETLAVVGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLF
SGTIGANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIA
LARALLHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAV
LDSGRLLDVGTPDEVWERCPRYRELLSPAPDLADDLVVAERSPVCRPVAGLGTKAAQHTN
VHNPGPHDHPPGPDPLRRLLREFRGPLALSLLLVAVQTCAGLLPPLLIRHGIDVGIRRHV
LSALWWAALAGTATVVIRWVVQWGSAMVAGYTGEQVLFRLRSVVFAHAQRLGLDAFEDDG
DAQIVTAVTADVEAIVAFLRTGLVVAVISVVTLVGILVALLAIRARLVLLIFTTMPVLAL
ATWQFRRASNWTYRRARHRLGTVTATLREYAAGLRIAQAFRAEYRGLQSYFAHSDDYRRL
GVRGQRLLALYYPFVALLCSLATTLVLLDGAREVRAGVISVGALVTYLLYIELLYTPIGE
LAQMFDDYQRAAVAAGRIRSLLSTRTPSSPAARPVGTLRGEVVFDAVHYSYRTREVPALA
GINLRIPAGQTVVFVGSTGSGKSTLIKLVARFYDPTHGTVRVDGCDLREFDVDGYRNRLG
IVTQEQYVFAGTVRDAIAYGRPDATDAQVERAAREVGAHPMITALDNGYLHQVTAGGRNL
SAGQLQLLALARARLVDPDILLLDEATVALDPATEAVVQRATLTLAARRTTLIVAHGLAI
AEHADRIVVLEHGTVVEDGAHTELLAAGGHYSRLWAAHTRLCSPEITQLQCIDA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgaattgctggtggcggttgtccggctatgtcatgcggcatcggcgcgatctg
ctgttgggattcggggcggcgctggccggcaccgtcatcgccgttttggttccgctggta
accaagcgtgtcatagacgacgcgatcgcggccgaccacagaccgctggcgccctgggcc
gtggttctggtcgccgccgccggggcgacctacttgctgacgtacgtacgccggtactac
ggcggtcgaattgcccacctggtacagcatgacctgcgcatggacgcctttcaggccctg
ttgcggtgggacggccgacaacaggaccggtggagcagcggccagctcatcgtccgcacc
accaatgacctgcaactggtgcaggcgttgctgttcgatgtgcccaatgtgctcaggcat
gtgctgacactgctactaggtgtcgcggtcatgacctggttgtcggtgccgcttgcgctg
cttgcggtgctgctggtacccgtgattggcctgatcgcccaccgcagccgccggctgctg
gccgcagccacccactgtgcccaggaacacaaggccgcggtcaccggagtcgtcgatgcg
gcggtctgcggaatccgggtcgtcaaggcgttcgggcaggaggagcgggagacggtcaag
ctggtgacggcatcccgcgcgctctatgctgcccagctgcgggtggccaggctcaacgca
cacttcggtccgctgctgcaaaccctgcccgcgttgggtcagatggcggtcttcgcgctc
ggcggatggatggccgcgcagggcagcattacggtgggcacctttgttgccttctgggcc
tgcctgacattgctggcgcggccggcatgcgatctggcggggatgctgaccattgcccag
caggcgcgcgccggcgcggtgcgggtactcgaactcatcgacagccggccgacgctggtt
gacggcaccaagccgctgtcgctggaggctcggttatcactggagttccagcgggtgtcc
ttcggatatgtggctgaccgccccgtgctccgcgagataagcctgtcggtccgggccggg
gagaccctggcggtggtcggtgcgccgggcagcggcaaatccacgttggcgtcgctggcg
acgcgttgctacgacgtcacacagggcgcggtgcggatcggtggtcaggatgtgcgcgag
ctgacgctcgactcgctgcggtcagccatcggcctggtacccgaagatgccgtcctgttc
tccggaacgatcggtgcaaacatcgcctatggccgcccggatgcgacgcccgaacagatt
gccacggcggcccgggcggcgcacatcgaggagttcgtcaacactctgccggacgggtat
cagacggccgtcggtgcgcgcggactgacgctgtccggcgggcaacgccaacgcatcgcc
ctggcccgggcgctactgcaccagccgcggttgttgatcatggacgacccgacctctgcc
gtggatgcggtcatcgaatgcggaattcaggaggtgctgcgggaggcgatcgcggatcgc
accgcggtcattttcacccgccgccgatccatgcttaccttggccgaccgggtcgcggtc
ctcgactccgggcgcctgctcgatgtcggcacccccgacgaggtgtgggagcgctgtccc
cgctatcgggaattgctgtcgcccgcgccggatctcgccgatgacctggttgtcgcggag
cgctcgccggtgtgtcgaccggtggccgggctcggcaccaaggccgcgcagcacaccaac
gtccacaaccccgggcctcacgatcacccacccggccccgacccgttacgccgcctgctg
cgtgagttccgcggcccgcttgcgttgagcctgctgttggtggccgtgcagacctgcgcg
ggtctgctgccgcccctgctcatccgccacggtattgacgtcgggattcgccgccatgtg
ctctcggcgctttggtgggcagcgctcgccggcaccgccaccgtggtcattaggtgggtc
gtgcagtgggggagtgccatggtcgccggatacaccggtgagcaggtgctgtttcgattg
cggtccgtcgtcttcgcccatgcccagcgcctgggcctggacgcatttgaagacgacgga
gatgcccagatcgtcaccgcggtcaccgccgacgtcgaggccatcgtggcgttcctgcgc
acgggtctggtcgttgccgtgatcagcgtggtgaccctggtcggcattttggtggcgctg
ctggccatccgcgcccggctggtgttgctgatcttcaccaccatgccggtgcttgccctt
gcgacctggcaattccgtcgggcgtcgaattggacctatcggcgggcgcggcaccggttg
gggacggtaaccgccacgttgcgtgagtacgcggcggggttgcggatcgcccaggcgttc
cgcgccgaataccggggactgcaaagctatttcgctcatagtgacgactatcgccgactt
ggggtgcgcgggcagcggctgctagccctgtactacccgttcgtggcattgctctgcagc
ctggcgaccaccctggtcctgctcgacggtgcacgcgaggtgcgagcgggggtgatctcg
gtcggagcgctggtgacctatctgctctacatcgagctgttgtacacgccgataggcgaa
ctggcgcaaatgttcgacgattaccagcgtgcggcggtggcggccgggcggatccggtcg
ctgctgagcacgcggacaccgtcgtcgccggcggcacgaccggtggggacgttgcgtggt
gaagtggttttcgacgccgtccactattcctaccgaacacgagaagtgccggcactggcc
ggcatcaacctgcgaattccggccgggcagacggtggtgttcgtcggctccaccggatcc
gggaaatccaccctgatcaagttggtggcgcggttctacgatccgacccatgggacggtc
cgagtcgacggatgcgacctgcgggagttcgatgtcgacggctatcgcaaccggctcggc
atcgtgacgcaggagcagtacgtcttcgccgggacggtccgcgatgccatcgcatacgga
cggcccgatgccaccgatgcccaggtcgaacgggctgcgcgggaggtcggtgcccatccg
atgatcaccgcactcgacaacgggtacctgcatcaggtcaccgcgggtgggcgcaatctg
tccgccggtcagctgcagttgctcgcattggccagggcgcgtctggttgaccccgacatt
ctgctgctggatgaggccaccgtggccctggatcctgccaccgaggccgtggtgcagcgg
gccaccctcaccctggcagcccgtcggacgaccttgatcgtggctcacgggctagccatc
gccgaacacgccgaccgcattgtcgtgctcgagcacggcaccgttgtcgaggacggcgcc
cacaccgaacttctcgctgctgggggccactattcgcggctgtgggcggcccatactcga
ctgtgttcgccggaaatcactcagcttcaatgtattgacgcatag
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