Mycobacterium tuberculosis variant microti: RN08_0748
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Entry
RN08_0748 CDS
T04291
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mmic
Mycobacterium tuberculosis variant microti
Pathway
mmic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RN08_0748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmic03400
]
RN08_0748
Enzymes [BR:
mmic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
RN08_0748
DNA repair and recombination proteins [BR:
mmic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RN08_0748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AMC58175
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All DBs
Position
772320..773078
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AA seq
252 aa
AA seq
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MLIGSHVSPTDPLAAAEAEGADVVQIFLGNPQSWKAPKPRDDAAALKAATLPIYVHAPYL
INLASANNRVRIPSRKILQETCAAAADIGAAAVIVHGGHVADDNDIDKGFQRWRKALDRL
ETEVPVYLENTAGGDHAMARRFDTIARLWDVIGDTGIGFCLDTCHTWAAGEALTDAVDRI
KAITGRIDLVHCNDSRDEAGSGRDRHANLGSGQIDPDLLVAAVKAAGAPVICETADQGRK
DDIAFLRERTGS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattggttcgcatgtcagcccaaccgatccgctggccgcagcggaggccgaaggc
gctgacgtagtgcagattttccttggcaatccgcagagctggaaggctcccaagccgcgg
gacgacgccgccgcgctgaaagccgcgaccctgcccatctacgtgcatgcgccctacctg
atcaaccttgcgtcggcgaacaatcgcgtgcggatcccgtcgcgcaagatcctgcaagag
acctgtgctgcggcggccgacattggcgcagcggcggtgatcgtgcacggtgggcacgtc
gccgacgacaacgacatcgacaagggcttccagcgctggcgcaaggcgctggaccggctg
gaaaccgaggttcccgtctacctggaaaacaccgccggcggcgatcacgcgatggcgcgc
cgcttcgacaccatcgcccggctctgggacgtcatcggcgacaccggaatcgggttttgc
ctggacacctgccacacctgggcggccggcgaggcgctgaccgatgccgtcgatcggatc
aaagcaattaccggccgcatcgatctggtgcactgcaacgactccagggacgaagcggga
tcgggccgtgaccgccacgccaacctcggcagcggccagattgatcctgacctgctggtg
gctgccgtcaaggcggccggcgcgccggtgatctgcgaaaccgccgaccaaggtcgcaag
gacgacatcgcgtttctgcgggaaagaaccggcagctga
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