Mycobacterium tuberculosis variant microti: RN08_0957
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Entry
RN08_0957 CDS
T04291
Name
(GenBank) DNA helicase Ercc3
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mmic
Mycobacterium tuberculosis variant microti
Pathway
mmic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RN08_0957
09124 Replication and repair
03420 Nucleotide excision repair
RN08_0957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmic03021
]
RN08_0957
03400 DNA repair and recombination proteins [BR:
mmic03400
]
RN08_0957
Enzymes [BR:
mmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RN08_0957
Transcription machinery [BR:
mmic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RN08_0957
DNA repair and recombination proteins [BR:
mmic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RN08_0957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Cox20
Motif
Other DBs
NCBI-ProteinID:
AMC58384
LinkDB
All DBs
Position
complement(961732..963381)
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGW
QLRDYQRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRE
LVARTSLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLD
QLDELGAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVS
GTFGSRQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
ttgactgacggaccattgatagtgcagtccgataagacggtgctgttggaagtcgaccat
gaactggccggcgctgcacgcgccgccatcgcgccgttcgccgagctggaacgtgcaccc
gaacatgtccacacctaccgcatcacaccgctggcactgtggaatgctcgcgccgccggc
catgatgccgagcaagtcgtcgacgcgctggtcagttactcccgctacgcggtgccgcaa
cccttgctcgtcgacatcgtcgacaccatggcccgctacggacgactgcagttggtcaag
aacccggcccatggcctgacgctggtgagcctggaccgcgcggtgcttgaggaagtgctg
cgcaacaagaagatcgcgccgatgcttggcgcccgcatcgatgacgacaccgtcgtcgtc
caccccagcgaacgcggccgggtcaagcagctgctgctcaagatcggttggcccgcagag
gatctcgccggctacgtcgatggtgaagcgcacccgatcagcctgcaccaggagggctgg
cagctgcgcgattaccagcggctggccgcggactcgttctgggcgggcggctccggggtg
gtggtgctgccatgtggggccggcaagacgctggtcggtgcggccgcaatggccaaagcc
ggcgcgacgacgttgatcctggtcaccaatatcgtcgcggcccggcaatggaaacgagag
ctggtcgcgcgcacctcgctcaccgagaatgagatcggcgaattctcgggagaacgcaag
gaaatccgacctgtcaccatctcgacataccagatgatcacccgccgcactaagggcgag
taccgccatctggaactgttcgacagccgcgactgggggctcatcatctatgacgaggtg
cacctgttgccggcaccggtcttccggatgaccgctgacctgcagtccaaacggcggctg
gggctgaccgccacgttgatccgtgaagacggacgcgagggcgacgtgttttcccttatc
ggaccaaagcgctatgacgcgccgtggaaggacattgaggcgcagggctggatcgcgcca
gctgagtgcgtggaagtccgggtcacgatgaccgacagcgagcggatgatgtacgccacc
gccgaacccgaagaacgctaccggatctgctcgacggtgcacaccaaaattgctgtggtc
aagtcgattctggcgaagcacccggatgagcagaccctggtcatcggagcgtacttggat
cagctcgacgagctgggcgccgagctcggagctccggtgattcaggggtcgacaaggacc
agcgaacgcgaggcactgttcgacgccttccgccgcggcgaggtcgctacgctcgtggtg
tccaaggtggctaacttctccatcgacttgccggaagccgccgtggcggtacaggtttcg
ggaacattcggctcacgccaggaagaggcgcaacggctcggccggatattgcgacccaag
gccgacgggggcggtgccatcttctactcggtggtggcccgcgacagcctggatgccgag
tacgccgcacaccggcagcggtttttagctgagcagggctacggttacatcatccgcgac
gccgacgacctgctgggcccggcaatttag
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