Mycobacterium tuberculosis variant microti: RN08_1228
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Entry
RN08_1228 CDS
T04291
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mmic
Mycobacterium tuberculosis variant microti
Pathway
mmic00260
Glycine, serine and threonine metabolism
mmic00460
Cyanoamino acid metabolism
mmic00630
Glyoxylate and dicarboxylate metabolism
mmic00670
One carbon pool by folate
mmic00680
Methane metabolism
mmic01100
Metabolic pathways
mmic01110
Biosynthesis of secondary metabolites
mmic01120
Microbial metabolism in diverse environments
mmic01200
Carbon metabolism
mmic01230
Biosynthesis of amino acids
mmic01240
Biosynthesis of cofactors
mmic04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RN08_1228
09102 Energy metabolism
00680 Methane metabolism
RN08_1228
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RN08_1228
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RN08_1228
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RN08_1228
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RN08_1228
Enzymes [BR:
mmic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RN08_1228
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
AMC58655
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Position
1223964..1225244
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AA seq
426 aa
AA seq
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MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFAPRAVLQAQGSVLTNKYAEGLPGRR
YYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLAN
GGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLD
FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRSGLIVGK
QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP
DVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTS
GLRIGTPALATRGFGDTEFTEVADIIATALATGSSVDVSALKDRATRLARAFPLYDGLEE
WSLVGR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccgctcgctgaggttgaccccgatatcgccgagttgctggccaaggagctt
ggtcggcaacgagacaccctggagatgatcgcctcggagaacttcgcaccgcgcgctgtg
ctgcaggcccagggcagtgtgctgaccaacaagtacgccgagggactgcccgggcggcgc
tactacggcggttgtgagcacgtcgacgtggtggaaaacctcgcccgcgaccgagccaag
gcgttgttcggtgccgaattcgccaatgtgcaaccgcattcgggcgctcaggccaacgcc
gcggtgctgcatgcgctgatgtcacccggcgagcggctgttgggtctggacctggccaac
ggtggtcacctgacccatggcatgcggctgaacttctccggcaagctctacgagaatggc
ttctacggcgtcgacccggcgacacatctgatcgacatggatgcggtgcgggccaccgca
ctcgaattccgcccgaaggtgatcatcgccggctggtcggcctacccgcgggtgctcgac
ttcgcggcgttccggtcgatcgccgacgaggtcggggccaagttgctcgtggacatggcg
catttcgcgggtctggtcgccgcggggttgcacccgtcgccggtgccgcacgcggatgtg
gtgtccaccaccgtgcacaagacgctcggcggcggccgctccggcctgatcgtcggtaag
cagcagtacgccaaggcgatcaactcggcggtgtttcccgggcagcagggcggtccgctc
atgcacgtcattgccggcaaggcggtcgcgttgaagatcgccgccacacccgaatttgcc
gaccggcagcggcgcacgctgtccggggcccggatcattgccgatcgactgatggctccc
gatgtcgccaaggccggtgtgtcggtggtcagcggcggcaccgacgtccacctggtgctg
gtcgatctgcgtgattccccactggatggccaggccgccgaggacctgctgcacgaggtc
ggcatcacggtcaaccgcaacgccgtccccaatgatccccgaccgccgatggtgacctcg
ggcctgcggataggcacgcccgcgctggcgacccgcggcttcggcgacaccgagttcacc
gaggtcgccgacattattgcgaccgcgctggcgaccggcagttccgttgatgtgtcggcg
cttaaggatcgggcgacccggctggccagggcgtttccgctctacgacgggctcgaggag
tggagtctggtcggccgctga
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