Mycobacterium tuberculosis variant microti: RN08_2196
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Entry
RN08_2196 CDS
T04291
Name
(GenBank) HTH-type transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
mmic
Mycobacterium tuberculosis variant microti
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmic03000
]
RN08_2196
03036 Chromosome and associated proteins [BR:
mmic03036
]
RN08_2196
Transcription factors [BR:
mmic03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RN08_2196
Chromosome and associated proteins [BR:
mmic03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RN08_2196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_24
HTH_AsnC-type
MarR_2
P22_Cro
HTH_Tnp_ISL3
pXO2-34
MarR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AMC59623
LinkDB
All DBs
Position
complement(2221910..2222821)
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AA seq
303 aa
AA seq
DB search
MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCR
ATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDV
LLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSD
GFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMF
PEKLAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRR
RPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccgcagcttgacggtccacagctggccgcattggctgccgtggtcgaactg
ggcagcttcgatgcggccgcggagcgcctacatgtcaccccctcggctgtcagtcagcgc
atcaagtcgttggagcagcaggtcggccaggtgctggtggtcagggaaaagccatgtcgg
gcgacgaccgcaggtatcccgctgttgcggttggccgcgcaaacagcgttgctcgagtcc
gaggcgctcgctgaaatgggtggcaacgcgtcgctgaaacgcacgcggatcaccattgcg
gtaaacgccgattccatggcgacatggttttcggccgtgttcgacggtctcggcgacgtc
ctgctcgacgttcggatcgaggaccaggaccattccgcgcggctgctacgggagggtgtg
gcgatgggcgcggtgaccaccgagcggaacccggtgccgggctgccgggtgcacccgctg
ggtgaaatgcgctacctaccagtggccagcaggccattcgtccagcgccatctatccgac
gggttcactgccgccgcggcggctaaagctccgtcactggcgtggaatcgtgacgatggg
ctgcaggacatgttggtgcgtaaggcctttcgtcgcgccatcaccagaccgacgcacttt
gtcccgaccacagagggcttcaccgccgcagcgcgcgccgggctgggatggggcatgttc
cccgagaagctggcagcatctccgcttgccgatggatcgttcgtacgggtctgcgacata
cacctcgacgtccctctctattggcaatgctggaaactggacagtccgatcatcgcgcga
attaccgacacggtgagggcggcggcaagcggtctgtaccggggccagcaacgccgccgc
cgaccgggttga
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