KEGG   Mycobacterium tuberculosis variant microti: RN08_3110
Entry
RN08_3110         CDS       T04291                                 
Name
(GenBank) CRISPR type III-associated RAMP protein Csm4
  KO
K19139  CRISPR-associated protein Csm4
Organism
mmic  Mycobacterium tuberculosis variant microti
Brite
KEGG Orthology (KO) [BR:mmic00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mmic02048]
    RN08_3110
Prokaryotic defense system [BR:mmic02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    RN08_3110
SSDB
Motif
Pfam: Csm4_C RAMPs
Other DBs
NCBI-ProteinID: AMC60537
LinkDB
Position
complement(3117124..3118032)
AA seq 302 aa
MNSRLFRFDFDRTHFGDHGLESSTISCPADTLYSALCVEALRMGGQQLLGELVACSTLRL
TDLLPYVGPDYLVPKPLHSVRSDGSSMQKKLAKKIGFLPAAQLGSFLDGTADLKELAARQ
TKIGVHAVSAKAAIHNGKKDADPYRVGYFRFELDAGLWLLATGSESELGLLTRLLKGISA
LGGERTSGFGAFNLTESEAPAALTPTVDAASLMTLTTSLPTDDELEAALAGATYRLVKRS
GFVASSTYADMPLRKRDIYKFAAGSVFSRPFQGGILDVSLGGNHPVYSYARPLFLALPES
AA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaactcgcggctgtttaggttcgacttcgaccgcacacacttcggcgaccacggcctc
gagtcgtccacgattagctgccccgcggacaccctctactctgcgctttgcgttgaagcg
ctacggatgggtggccagcagctgcttggcgaactcgttgcgtgctcgacgctgcggttg
accgatctgctgccctatgtggggcccgattacctggttcccaagcccctgcacagcgtt
cggtccgacggctcaagtatgcagaagaagctggcgaagaagatcggctttcttcccgct
gcccagcttggcagcttcctcgatggcacggccgacctgaaagaactcgcggcgcggcag
accaagatcggtgtccacgccgtgtcagcgaaggcagcgatccacaacggaaagaaagac
gccgacccgtaccgtgtcggctacttccggttcgagctggacgcgggtctgtggttgctg
gcgaccggatccgagtccgagctcggcctactcaccaggctgttgaaagggatctccgcg
ctgggcggcgaacggacaagcgggttcggagcgtttaaccttaccgagtcagaagcaccc
gccgcactcacgccgacagtcgacgcggccagtctgatgacgctcacgacatccctaccc
acggacgacgagctcgaagccgcactcgccggcgcgacgtaccgcctcgtcaagcgcagt
ggattcgtcgcgtcgagcacatacgctgacatgcccctgcgcaaacgcgacatctacaaa
ttcgccgccggctcggtcttctcgcgccccttccaaggaggcatcctcgacgtcagcctg
ggcggaaaccatccggtctacagctacgcgcgaccgctatttctcgcactcccggagtcc
gccgcatga

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